Pairwise Alignments

Query, 308 a.a., ABC transporter, membrane spanning protein (agrocinopine) from Agrobacterium fabrum C58

Subject, 307 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  194 bits (494), Expect = 2e-54
 Identities = 104/305 (34%), Positives = 169/305 (55%)

Query: 1   MISFILARLVRAIIVMMLTVTFVFIILRLGGDPARAMLGENATPEALAAFRTAWGLDRSI 60
           M +FIL R  +++I ++  +  VF + RL GDPA   L  +++     AF    G +  +
Sbjct: 1   MFAFILRRAGQSLIAVIGLLVLVFFLSRLTGDPAYLYLPLDSSEAQRQAFSETHGFNDPL 60

Query: 61  PEQFLIYLASALRGDFGVSAADGREVFTVISERIPKTLTLTISAFVLSILVGIPAGIIAA 120
             QF  YL    R DFG + +  R    V  E  P+TL L + A VLS+   +  G +AA
Sbjct: 61  VVQFGRYLVDLARFDFGDALSRNRPAMEVALEAFPQTLKLAVIAIVLSLCFAVVVGSLAA 120

Query: 121 VRRDSAADKSVMAGAVLGYSVPNFLLGLTLIFVFAVWFRVLPSSGSSTWQHAILPVATFG 180
            R +S  DK     ++ G S P+F + +  I VF+V   +LP+SG+ T  H I+P+    
Sbjct: 121 ARPNSLFDKIASTASLAGASAPDFWVAIVAILVFSVGLGLLPTSGTGTALHWIMPIFVLT 180

Query: 181 LVNAAAIARFARSALIEVLEQPYIAAARADGIPKWEVVIRHALPNAAIPMVTMLGFVAAG 240
           L     + +  R  ++  L  PY+  ARA G+ +  +V RHAL N+ +P++T+ G +AA 
Sbjct: 181 LRPFGLLVQVVRGTMMGALASPYVKTARAKGVNRSRIVFRHALRNSLLPVITVAGDLAAS 240

Query: 241 LLGGSAIVETVFAWPGLGSGFVRAITLSDLNVVQAMILLFTAFMVTINLIVDVLYAVLNP 300
           L+ G+ +VET+F WPG+G   + AI   D  ++QA +L+    +  +N+ +D++YA L+P
Sbjct: 241 LVNGAVVVETIFGWPGIGKLMIDAIVRRDFALIQATVLVTAIAIFVLNIAIDLVYARLDP 300

Query: 301 KIRLQ 305
           +IR +
Sbjct: 301 RIRFE 305