Pairwise Alignments

Query, 658 a.a., conjugative transfer protein, Coupling protein from Agrobacterium fabrum C58

Subject, 639 a.a., conjugal transfer protein TraG from Sinorhizobium meliloti 1021

 Score =  478 bits (1230), Expect = e-139
 Identities = 273/637 (42%), Positives = 386/637 (60%), Gaps = 21/637 (3%)

Query: 6   LLLLILPAIIMLAAMFATSGMEQRLAAFGTSPQAKLMLGRAGLALPYIAAVAIGIIGLFA 65
           LL+++ P  +  AA++        LAA G S +      RA      +     G++ ++A
Sbjct: 11  LLVILFPVAVTAAAVYVVGWRWPGLAA-GMSGKTAYWFLRAAPVPALLFGPLAGLLAVWA 69

Query: 66  ANGSANIKAAGLSVLAGSGVVITIATLREVIRLN-SIASSVPAEQSVLAYADPVTMIGAS 124
                  +   ++ LA    V     LRE  RL+ S+ S   +    L+Y D V ++GA 
Sbjct: 70  LPLHRR-RPVAMASLACFLTVAGFYALREFGRLSPSVESGALSWDRALSYLDMVAVVGAV 128

Query: 125 IAFISGMFALRVAIKGNAAFATTAPKRIG-GKRAVHGEADWMKIQEAAKLFPERGGIIIG 183
           + F+        A+  +A  +T  P+ +   KR   G+ADW+ +  A KLFP  G I+IG
Sbjct: 129 VGFM--------AVAVSARISTVVPEPVKRAKRGTFGDADWLPMAAAGKLFPPDGEIVIG 180

Query: 184 ERYRVDRDSVAAMPFRADDRQSWGAGGKSPLLCFDGSFGSSHGIVFAGSGGFKTTSVTIP 243
           ERYRVD+D V  +PF  +D  +WG GGK+PLL +   F S+H + FAGSGG+KTTS  +P
Sbjct: 181 ERYRVDKDIVHELPFEPNDPATWGQGGKAPLLTYRQDFDSTHMLFFAGSGGYKTTSNVVP 240

Query: 244 TALKWGGGLVVLDPSSEVAPMVCEHR-RQAGRKVIVLDPTAGGVGFNALDWIGRHGNTKE 302
           TAL++ G L+ LDPS+EVAPMV EHR R  GR+V+VLDPT   +GFN LD I  H   KE
Sbjct: 241 TALRYTGPLICLDPSTEVAPMVVEHRTRVLGREVMVLDPTNPIMGFNVLDGI-EHSRQKE 299

Query: 303 EDIVAVATWIMTDNPRTASARDDFFRASAMQLLTALIADVCLSGHTETEDQTLRRVRANL 362
           EDIV +A  +++++ R  S+   +F+  A  LLT L+A V LS       +TLR +R  +
Sbjct: 300 EDIVGIAHMLLSESVRFESSTGSYFQNQAHNLLTGLLAHVMLSPEYAGR-RTLRSLRQIV 358

Query: 363 SEPEPKLRARLTKIYEGSESDFVKENVSVFVNMTPETFSGVYANAVKETHWLSYPNYAGL 422
           SEPEP + A L  I E S S F++E + VF NMT +TFSGVY+ A K+T WLS  +YA L
Sbjct: 359 SEPEPSVLAMLRDIQERSASTFIRETLGVFTNMTEQTFSGVYSTASKDTQWLSLDSYAAL 418

Query: 423 VSGDSFSTDDLADGGTDIFIALDLKVLEAHPGLARVVIGSLLNAIYNRNGNVKGRTLFLL 482
           V G++F + D+  G  D+F+ +   +L ++PG+ RV+IGSL+NA+   +G+ K R LF+L
Sbjct: 419 VCGNAFKSSDIVSGKKDVFLNIPASILRSYPGIGRVIIGSLINAMIQADGSFKRRALFML 478

Query: 483 DEVARLGYLRILETARDAGRKYGIMLTMIFQSLGQMREAYGGRDATSKWFESASWISFAA 542
           DEV  LGY+R+LE ARD GRKYGI + +++QSLGQ+ E + GRD    W +  ++ S+AA
Sbjct: 479 DEVDLLGYMRLLEEARDRGRKYGISMMLLYQSLGQL-ERHFGRDGAVSWIDGCAFASYAA 537

Query: 543 INDPDTADYISKRCGDTTVEVDQTNRSTGM----KGSSRSRSKQLSRRPLILPHEVLH-M 597
           +   DTA  IS +CG+ TVEV  ++R+ G       S +S +    RRPLI+PHE+   M
Sbjct: 538 VKALDTARNISAQCGEMTVEVKGSSRNIGWDTKNSASRKSENVNYQRRPLIMPHEITQSM 597

Query: 598 RSDEQIVFTSGNPPLRCGRAIWFRRDDMKACVGENRF 634
           R DEQI+   G+ P+RCGRAI+FRR DM      NRF
Sbjct: 598 RKDEQIIIVQGHSPIRCGRAIYFRRKDMNEAAKANRF 634