Pairwise Alignments

Query, 353 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 556 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  166 bits (420), Expect = 1e-45
 Identities = 95/248 (38%), Positives = 135/248 (54%), Gaps = 12/248 (4%)

Query: 38  IPDRVEPALALLKAKPPTGNEWSWELKWDGYRLAVHIEPQRIRILTRGGHDWTHRFPAIE 97
           +PD +EP L    A+PP  ++W  E+K+DGYR+ + I   ++ + TR G DWT ++P I 
Sbjct: 243 LPDFIEPQLCETLARPPASDDWLHEIKFDGYRIQMRIADGKVTLKTRKGLDWTAKYPEIA 302

Query: 98  QAARALGPATMIIDGEAVVLDDEGRPDFGLLQQSLGASGKQAGRRASHAVLYAFDLVYLD 157
            AA  L     IIDGE   LDD G PDF  LQ +L         +  + V +AFDL++  
Sbjct: 303 DAASEL--PDCIIDGEICALDDNGAPDFAALQAALSEG------KTGNLVYFAFDLLFDG 354

Query: 158 GHDLRGVEYRSRRHLLEDTINGPTNEASAIRISETLDAEPAVLLEHVCRLGLEGIVGKRL 217
           G DLR +    R+  LED +   +++   IR  +  ++    +L   C+L LEGIV K++
Sbjct: 355 GEDLRSMRLVERKKRLEDFLAAGSDD-PRIRYVDHFESGGDAVLRSACKLSLEGIVSKQM 413

Query: 218 DQPYRSGRTGDWVKVKCIQSEAFFIVGYERSASYPAGFGSLALAAYRDGDLVHVGSVGTG 277
           D PY+SGRT  W K KC       I GY   A+    F SL +  +R    V+VG VGTG
Sbjct: 414 DAPYQSGRTDTWAKSKCRAGHEVVIGGY---ATTNGKFRSLLVGVHRGDHFVYVGRVGTG 470

Query: 278 FKGAEIIR 285
           F  A++ R
Sbjct: 471 FGAAKVER 478