Pairwise Alignments

Query, 353 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 818 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  204 bits (520), Expect = 5e-57
 Identities = 120/311 (38%), Positives = 170/311 (54%), Gaps = 17/311 (5%)

Query: 39  PDRVEPALALLKAKPPTGNE-------WSWELKWDGYRLAVHIEPQRIRILTRGGHDWTH 91
           P+R+EP LA     PP   +       W  E+K+DGYR   H+   ++R++TRGG DWT 
Sbjct: 213 PERIEPQLATQTILPPEAEKDSKKPERWLHEIKFDGYRTMAHVADGKVRLVTRGGLDWTK 272

Query: 92  RFPAIEQAARALGPATMIIDGEAVVLDDEGRPDFGLLQQSLGASGKQAGRRASHAVLYAF 151
           R+  + +  R L    +IIDGE VVLD+ G   F LLQ +L           +  V YAF
Sbjct: 273 RYGDLPEVFRRLPCRDVIIDGEIVVLDETGVSRFALLQDALSTGA------GNSLVFYAF 326

Query: 152 DLVYLDGHDLRGVEYRSRRHLLEDTINGPTNEASAIRISETLDAEPAVLLEHVCRLGLEG 211
           DL++L+G +L  V    R+ LL+  + G  +  SAI+ S+ +  E   L +    +GLEG
Sbjct: 327 DLLHLNGWNLFDVPLEKRKALLKQLLAGQVSSRSAIQFSDHVLGEGRALYDRASEMGLEG 386

Query: 212 IVGKRLDQPYRSGRTGDWVKVKCIQSEAFFIVGYERSASYPAGFGSLALAAYRDGDLVHV 271
           IV KR+  PYRSGR+  W K K +++E F IVGY  S +   G  SLAL  + DG+L + 
Sbjct: 387 IVSKRISAPYRSGRSKTWTKTKALKAEDFVIVGYTVSEA-AEGIASLALGEWADGELEYR 445

Query: 272 GSVGTGFKGAEIIRLRKILDTLRWKRKQPPLPHSGTADIVWVQPTLIAEIEFRAWTSDGK 331
           G VGTGF   +   L+++L  L   R           +I+WV+P L A I +   T+D  
Sbjct: 446 GKVGTGF---DAQMLKELLARLEPLRAGAAKLEGAPREIIWVRPLLRAHIHYGNRTTDNV 502

Query: 332 LRHPSYKGLRE 342
           LRH  +KGLR+
Sbjct: 503 LRHAVFKGLRD 513