Pairwise Alignments

Query, 353 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 355 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score = 84.3 bits (207), Expect = 4e-21
 Identities = 106/347 (30%), Positives = 148/347 (42%), Gaps = 35/347 (10%)

Query: 21  KPRRKRNPAQPQLLFD--PIPDRVEPALALLKAKPPTGNEWSWELKWDGYRLAVHIEPQR 78
           KP +K  P+         P+P    P  A    + P G+ W +E KWDG+R         
Sbjct: 8   KPTKKAAPSSAAKKAGGFPLPVSTAPMEARSATELPGGDAWQYEPKWDGFRCLAFKSGDE 67

Query: 79  IRILTRGGHDWTHRFPAIEQAARALGPATMIIDGEAVVLDDEGRPDFGLLQQSL--GASG 136
           + I  + G      FP I    R L P   ++DGE +V++ +GR  F  LQ  L   AS 
Sbjct: 68  VDIRAKSGKPLGRFFPEIVALLRRLEPDMFVLDGE-LVIEVDGRLSFDALQMRLHPAASR 126

Query: 137 KQAGRRASHAVLYAFD-LVYLDGHDLRGVEYRSRRHLLEDTINGPTNEASAIRISETLDA 195
            Q   + + A L  FD L   DG  L G   ++RR  LE         A    ++E L++
Sbjct: 127 VQKLSQETPAKLILFDMLAGTDGTILTGEPLQTRRACLEAF-------AKKNAVAEMLES 179

Query: 196 EPAVL-LEHVCRL-------GLEGIVGKRLDQPYRSGRTGDWVKVKCIQSEAFFIVGYER 247
            P  L ++   R          +G+V KR D  Y  G     VKVK +++ A  +VG  R
Sbjct: 180 SPFTLDIKEAERWLTSWEAGATDGVVAKRRDGVYECGERA-MVKVKRLKT-ADCVVGGFR 237

Query: 248 SASYPAGFGSLALAAY-RDGDLVHVGSVGTGFKGAEIIRLRKILDTLR----WKRKQP-- 300
             S  +  GSL L  Y  +G L HVG   T     E   L   L+ LR    +  K P  
Sbjct: 238 YESDSSLVGSLLLGLYDTEGLLNHVGFTAT-ISDKERPALTNQLEALREPPGFTGKAPGG 296

Query: 301 PLPHSGTADIVW--VQPTLIAEIEFRAWTSDGKLRHPSYKGLRERQD 345
           P   S      W  V+P L+ E+ F    S+ + RH + K +R R D
Sbjct: 297 PSRWSSERSGEWEPVRPELVVEVRF-DHVSNRRFRHGT-KLMRWRPD 341