Pairwise Alignments

Query, 353 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 573 a.a., ATP-dependent DNA ligase from Methanococcus maripaludis S2

 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 82/367 (22%), Positives = 154/367 (41%), Gaps = 49/367 (13%)

Query: 18  IRSKPRRKRNPAQPQLLFDPIPDRVEPAL--ALLKAKPPTGNEWSWELKWDGYRLAVHIE 75
           I + P  K    +P     P+  ++ P++  A+++ K P      +E K+DG R+ VH  
Sbjct: 212 IENDPELKLKVFRP---IKPMLAQLTPSIEDAMIETKMP-----QFETKYDGARVQVHKS 263

Query: 76  PQRIRILTRGGHDWTHRFPAIEQAARALGPATMIIDGEAVVLD-DEG--RPDFGLLQQSL 132
              ++I +R   + T+  P + +  + L    +I++GE V +D D G  RP   +L++  
Sbjct: 264 NGDVKIYSRRLENITNSVPELVEEIKKLDIDNIILEGECVAMDLDSGKPRPFQDILRRFR 323

Query: 133 GASGKQAGRRASHAVLYAFDLVYLDGHDLRGVEYRSRRHLLEDTINGPTNEASAIRISET 192
                          +Y FD++Y +   L     ++RR +LE        ++   +I + 
Sbjct: 324 RKYNIDKMAEKIALRIYFFDVLYYN-RGLIDTPLKTRREILEKLFGTNNWDSELEKIKKE 382

Query: 193 L-------------DAEPAVLLEHV---CRLGLEGIVGKRLDQPYRSG-RTGDWVKVKCI 235
           +               +P ++ E       +G EGI+ K  D PY  G R     KVK  
Sbjct: 383 IFSSKMLFSSFKLNSGDPNLVKEFFNWSLSIGHEGIMIKNPDAPYTPGSRVKTMYKVKPT 442

Query: 236 QSEAFFIVGYER--SASYPAGFGSLALAAY-RDGDLVHVGSVGTGFKGAEIIRLRKILDT 292
                 +V   +         +GS  L+    DG+L  +G+VG+G    ++ +L KI++ 
Sbjct: 443 LENLDVVVTRAKIGMGKRKDWYGSYELSVKDNDGNLHVIGNVGSGLTEDDLEKLTKIVNE 502

Query: 293 LRWKRKQPPLPHSGTADIVWVQPTLIAEIEFRAWTSDGK------LRHPSYKGLRERQDN 346
           ++ +            + V ++P ++ E+ +    +  K      LR P    +RE +  
Sbjct: 503 IKIE---------DLGEEVILEPKIVLEVTYEEIQTSEKYEMGYALRFPRVVQIREDKSI 553

Query: 347 ADVYQLD 353
            D+  LD
Sbjct: 554 NDINTLD 560