Pairwise Alignments

Query, 333 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

Subject, 328 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  419 bits (1078), Expect = e-122
 Identities = 208/328 (63%), Positives = 266/328 (81%)

Query: 6   MKRLTRVGRSLLRNLIQAVPTMFVIVTLGFFVLQLAPGDAADYMAAESGAATQETVADIR 65
           M  L R+ R+L R L+QAVPT+  IV L FF+LQLAPGDAAD +A E+G+AT+E+VA +R
Sbjct: 1   MPVLIRIARTLRRTLLQAVPTILGIVILNFFLLQLAPGDAADVLAGEAGSATEESVAALR 60

Query: 66  RAFGLDLPLLDQLANYYTSLAHFSLGISPRYGVPVADLIMERLPGTLTLMVLAIVIALLV 125
             FGLD P+L+QLA Y  +LA FSLG SPRYG+PVADLI +RLPGTLTLM +A+ IA+L+
Sbjct: 61  ARFGLDSPVLEQLATYLGNLAQFSLGFSPRYGMPVADLIAQRLPGTLTLMAVALFIAILL 120

Query: 126 GIAAGTIMALNATRAADRILSVASLLFYSVPTFWIGLIFIIVFSVKLGWLPAGGMKTIGA 185
           G+  G++MA  A R  DR+LS+ SLLFYS+P+FWIGL+ I++FSVKLGWLP+GG  TIG+
Sbjct: 121 GVVLGSLMASFAGRIPDRLLSIFSLLFYSIPSFWIGLMLIVLFSVKLGWLPSGGAATIGS 180

Query: 186 SSGGFGWLIDRVSYALLPATSLALYYMAIYARLTRSSILEVIGQDHVRTAKAKGLAPRQV 245
              GF  L+D+  Y +LPATSLAL+Y+AIYARLTR+++LEV   D VRTA AKGL P  V
Sbjct: 181 QLKGFPALLDKARYMVLPATSLALFYVAIYARLTRAAMLEVKNHDFVRTAYAKGLTPFGV 240

Query: 246 VLRHVLRNALIPITTVAGIHVAGILGGAIVIETVFSWPGMGRLAFDAVMAREYTLLLGIM 305
             RH+LRNALIPITT+AG+H+ G+LGGA+V+ETV+SWPG+GRLAF+AVM R++T+LLGI+
Sbjct: 241 TARHILRNALIPITTMAGMHIGGMLGGAVVVETVYSWPGLGRLAFEAVMGRDFTVLLGIL 300

Query: 306 LVSSVLVICVNAIVDIIQAALDPRIEVR 333
           L+SS+LVI  NA VD++ A LDPRI  R
Sbjct: 301 LLSSLLVIIANAAVDLVHAWLDPRIGAR 328