Pairwise Alignments

Query, 555 a.a., ABC transporter, nucleotide binding/ATPase protein (peptide) from Agrobacterium fabrum C58

Subject, 553 a.a., ABC-type uncharacterized transport system, duplicated ATPase component from Pseudomonas stutzeri RCH2

 Score =  459 bits (1180), Expect = e-133
 Identities = 265/560 (47%), Positives = 357/560 (63%), Gaps = 47/560 (8%)

Query: 5   LLGVRDLSVRYHSRSGEAVAVENLSFDIAAGEAVALVGESGCGKSTTALALSNLLPDEAS 64
           L+ VRDL+V + +       VE ++FDI  GE +ALVGESG GKS TA ++  LLP   +
Sbjct: 10  LVEVRDLAVEFVTGEQVQRVVEGVTFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLA 69

Query: 65  S--SGEVTFDGLDLFRLPPKAWRPILGPRIGMIFQEPMSALNPVYTVGDQIAEVLHAHER 122
               G++ F G DL +   KA R I G RI M+FQEPM++LNP++TVG QI EVL  H+ 
Sbjct: 70  RHPQGQILFHGQDLLKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQINEVLEIHKG 129

Query: 123 LSRKAARSRVLELLDLVSMPEPHRRIASYPHELSGGQRQRAMIAQAIALTPLLLIADEPT 182
           L  KAA +R LELL+LV +PEP +RI +YPHELSGGQRQR +IA A+A  P LLIADEPT
Sbjct: 130 LRGKAATARTLELLELVGIPEPRKRIRAYPHELSGGQRQRVVIAMALANEPELLIADEPT 189

Query: 183 TALDSTIQSQILELIDRLRRDLSMGLLLISHDLTLVSRWTDRVVVMHNGKRMEELKAEHL 242
           TALD T+Q +ILEL+  L+  L M LLLISHDL LV R   RV VM  G+ +E+   E L
Sbjct: 190 TALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGRVVEQALCEDL 249

Query: 243 FQESQHPYTKGLIGASIRLGDGRHASSERLNEIRTHRNSNGTTSFEIRSPPVAAEPRTNA 302
           F+  QHPYT+ L+ A                              E    PVA E     
Sbjct: 250 FRAPQHPYTQELLAA------------------------------EPSGGPVAVE----- 274

Query: 303 TADALLEVEDLTVRYDPASK--------TPPAVDRVTFELLRGETLGLVGESGSGKSSLS 354
            A  LLEV+DL V + P  K           AVD V F L +G+TLG+VGESGSGKS+L 
Sbjct: 275 EAPPLLEVDDLRVWF-PIKKGLLRRTVDHIKAVDGVNFSLPKGQTLGIVGESGSGKSTLG 333

Query: 355 KALSRLIPVAGGQILFEGQDITHAGGADLRAFRGRVQMIFQDPYSSLNPRRTVGDILDSV 414
            A+ RL+  + G+I F+GQ +       +R  R ++Q++FQDP+ SL+PR +VG I+   
Sbjct: 334 LAILRLLG-SRGEIRFQGQHLQSMSQRQVRPLRRQMQVVFQDPFGSLSPRMSVGQIVGEG 392

Query: 415 LHAHKYRNSADRQSRISEALDQVRLPRSAVERFPHEFSGGQRQRIAIARALIVRPSLVIC 474
           LH H+  N+ +++  I EAL +V L      R+PHEFSGGQRQRIAIARAL+++P+L++ 
Sbjct: 393 LHIHRMGNAKEQEQAIIEALVEVGLDPETRHRYPHEFSGGQRQRIAIARALVLKPALILL 452

Query: 475 DEPVSALDVSVQAQILNLLADLKEEAGLSYLFISHDLAVVKYISDRIMVMKDGHIIERGN 534
           DEP SALD +VQ Q++ LL  L+ +  L+YLFISHDLAVV+ +S ++MV+K G ++E+G 
Sbjct: 453 DEPTSALDRTVQRQVVELLRSLQAKYNLTYLFISHDLAVVRALSHQMMVVKQGQVVEQGA 512

Query: 535 HQNLWSNPSHEYTRKLIAAA 554
             ++++ P H YT++L+ +A
Sbjct: 513 AADIFAAPQHPYTQQLLESA 532



 Score =  208 bits (529), Expect = 5e-58
 Identities = 115/258 (44%), Positives = 163/258 (63%), Gaps = 8/258 (3%)

Query: 304 ADALLEVEDLTVRYDPASKTPPAVDRVTFELLRGETLGLVGESGSGKSSLSKALSRLIPV 363
           A+ L+EV DL V +    +    V+ VTF++ +GETL LVGESGSGKS  + ++ RL+P 
Sbjct: 7   AENLVEVRDLAVEFVTGEQVQRVVEGVTFDIRKGETLALVGESGSGKSVTAHSILRLLPY 66

Query: 364 A-----GGQILFEGQDITHAGGADLRAFRG-RVQMIFQDPYSSLNPRRTVGDILDSVLHA 417
                  GQILF GQD+  A    +R  RG R+ M+FQ+P +SLNP  TVG  ++ VL  
Sbjct: 67  PLARHPQGQILFHGQDLLKADEKAMRKIRGNRIAMVFQEPMTSLNPLHTVGKQINEVLEI 126

Query: 418 HKYRNSADRQSRISEALDQVRLP--RSAVERFPHEFSGGQRQRIAIARALIVRPSLVICD 475
           HK        +R  E L+ V +P  R  +  +PHE SGGQRQR+ IA AL   P L+I D
Sbjct: 127 HKGLRGKAATARTLELLELVGIPEPRKRIRAYPHELSGGQRQRVVIAMALANEPELLIAD 186

Query: 476 EPVSALDVSVQAQILNLLADLKEEAGLSYLFISHDLAVVKYISDRIMVMKDGHIIERGNH 535
           EP +ALDV+VQ +IL LL +L+   G++ L ISHDL +V+ I+ R+ VM+ G ++E+   
Sbjct: 187 EPTTALDVTVQLKILELLKELQARLGMALLLISHDLNLVRRIAHRVCVMQRGRVVEQALC 246

Query: 536 QNLWSNPSHEYTRKLIAA 553
           ++L+  P H YT++L+AA
Sbjct: 247 EDLFRAPQHPYTQELLAA 264



 Score =  167 bits (422), Expect = 1e-45
 Identities = 101/262 (38%), Positives = 151/262 (57%), Gaps = 16/262 (6%)

Query: 2   AIPLLGVRDLSVRYHSRSG-------EAVAVENLSFDIAAGEAVALVGESGCGKSTTALA 54
           A PLL V DL V +  + G          AV+ ++F +  G+ + +VGESG GKST  LA
Sbjct: 276 APPLLEVDDLRVWFPIKKGLLRRTVDHIKAVDGVNFSLPKGQTLGIVGESGSGKSTLGLA 335

Query: 55  LSNLLPDEASSSGEVTFDGLDLFRLPPKAWRPILGPRIGMIFQEPMSALNPVYTVGDQIA 114
           +  LL     S GE+ F G  L  +  +  RP L  ++ ++FQ+P  +L+P  +VG  + 
Sbjct: 336 ILRLL----GSRGEIRFQGQHLQSMSQRQVRP-LRRQMQVVFQDPFGSLSPRMSVGQIVG 390

Query: 115 EVLHAHERLSRKAARSRVLELLDLVSM-PEPHRRIASYPHELSGGQRQRAMIAQAIALTP 173
           E LH H   + K     ++E L  V + PE   R   YPHE SGGQRQR  IA+A+ L P
Sbjct: 391 EGLHIHRMGNAKEQEQAIIEALVEVGLDPETRHR---YPHEFSGGQRQRIAIARALVLKP 447

Query: 174 LLLIADEPTTALDSTIQSQILELIDRLRRDLSMGLLLISHDLTLVSRWTDRVVVMHNGKR 233
            L++ DEPT+ALD T+Q Q++EL+  L+   ++  L ISHDL +V   + +++V+  G+ 
Sbjct: 448 ALILLDEPTSALDRTVQRQVVELLRSLQAKYNLTYLFISHDLAVVRALSHQMMVVKQGQV 507

Query: 234 MEELKAEHLFQESQHPYTKGLI 255
           +E+  A  +F   QHPYT+ L+
Sbjct: 508 VEQGAAADIFAAPQHPYTQQLL 529