Pairwise Alignments

Query, 555 a.a., ABC transporter, nucleotide binding/ATPase protein (peptide) from Agrobacterium fabrum C58

Subject, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  432 bits (1110), Expect = e-125
 Identities = 246/557 (44%), Positives = 342/557 (61%), Gaps = 41/557 (7%)

Query: 1   MAIPLLGVRDLSVRYHSRSGEAVAVENLSFDIAAGEAVALVGESGCGKSTTALALSNLL- 59
           MA  LL VR+LSV +H+ +G   AV+++S+ +  GE +A++GESG GKS ++ A+ NL+ 
Sbjct: 1   MAEHLLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLID 60

Query: 60  -PDEASSSGEVTFDGLDLFRLPPKAWRPILGPRIGMIFQEPMSALNPVYTVGDQIAEVLH 118
            P    SSGE+  DG DL  +P +  R + G R+ MIFQ+P+S LNPVY+VG QI+E + 
Sbjct: 61  MPPGRISSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMT 120

Query: 119 AHERLSRKAARSRVLELLDLVSMPEPHRRIASYPHELSGGQRQRAMIAQAIALTPLLLIA 178
            H  L+   AR   L LL  V +PEP R +  YPHE SGGQRQR MIA A+AL P LLIA
Sbjct: 121 THG-LAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIA 179

Query: 179 DEPTTALDSTIQSQILELIDRLRRDLSMGLLLISHDLTLVSRWTDRVVVMHNGKRMEELK 238
           DEPTTALD T+Q+++L+L+  L+R+  M +L+I+HDL +VS   DRVVVM  G  +E   
Sbjct: 180 DEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGT 239

Query: 239 AEHLFQESQHPYTKGLIGASIRLGDGRHASSERLNEIRTHRNSNGTTSFEIRSPPVAAEP 298
              +++  QHPYT+ LI A+                                 P   A  
Sbjct: 240 VREIYKNPQHPYTQKLIAAA---------------------------------PGKGAMH 266

Query: 299 RTNATADALLEVEDLTVRYDPASKTPPAVDRVTFELLRGETLGLVGESGSGKSSLSKALS 358
              A A+ LL V D+   Y        A+  ++F+L+ GET+ +VGESGSGKS+L++AL 
Sbjct: 267 EPGARAEPLLSVRDVRKTYGSFE----ALKGISFDLMPGETMAVVGESGSGKSTLARALL 322

Query: 359 RLIPVAGGQILFEGQDITHAGGADLRAFRGRVQMIFQDPYSSLNPRRTVGDILDSVLHAH 418
           RL     G  L++G+D+     A+L   R  +QM+FQDP  SLNPR TV  ++      H
Sbjct: 323 RLDEPDSGTALWKGRDLFALSPAELYKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIH 382

Query: 419 K-YRNSADRQSRISEALDQVRLPRSAVERFPHEFSGGQRQRIAIARALIVRPSLVICDEP 477
                 A  + R++E L QV L    + R+PH+FSGGQRQRIAIARAL + P L+ICDE 
Sbjct: 383 PDILPKAKWRERVAELLVQVGLSAEHMSRYPHQFSGGQRQRIAIARALALEPQLIICDEA 442

Query: 478 VSALDVSVQAQILNLLADLKEEAGLSYLFISHDLAVVKYISDRIMVMKDGHIIERGNHQN 537
           VSALDVSVQAQ++ LL  L+ E G++++FI+HDL VV+  +D +MVM+ G ++E G  + 
Sbjct: 443 VSALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGTVRE 502

Query: 538 LWSNPSHEYTRKLIAAA 554
           ++  P   YTR L+AA+
Sbjct: 503 VFDTPRQAYTRALLAAS 519



 Score =  177 bits (449), Expect = 9e-49
 Identities = 109/259 (42%), Positives = 153/259 (59%), Gaps = 11/259 (4%)

Query: 2   AIPLLGVRDLSVRYHSRSGEAVAVENLSFDIAAGEAVALVGESGCGKSTTALALSNLLPD 61
           A PLL VRD+   Y    G   A++ +SFD+  GE +A+VGESG GKST A AL  L   
Sbjct: 272 AEPLLSVRDVRKTY----GSFEALKGISFDLMPGETMAVVGESGSGKSTLARALLRL--- 324

Query: 62  EASSSGEVTFDGLDLFRLPPKAWRPILGPRIGMIFQEPMSALNPVYTVGDQIAEVLHAHE 121
           +   SG   + G DLF L P      L   + M+FQ+P  +LNP  TV   I+E    H 
Sbjct: 325 DEPDSGTALWKGRDLFALSPAELYK-LRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHP 383

Query: 122 RLSRKAA-RSRVLELLDLVSMPEPHRRIASYPHELSGGQRQRAMIAQAIALTPLLLIADE 180
            +  KA  R RV ELL  V +   H  ++ YPH+ SGGQRQR  IA+A+AL P L+I DE
Sbjct: 384 DILPKAKWRERVAELLVQVGLSAEH--MSRYPHQFSGGQRQRIAIARALALEPQLIICDE 441

Query: 181 PTTALDSTIQSQILELIDRLRRDLSMGLLLISHDLTLVSRWTDRVVVMHNGKRMEELKAE 240
             +ALD ++Q+Q++EL+DRLRR++ +  + I+HDL +V  + D V+VM  G+ +E     
Sbjct: 442 AVSALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGTVR 501

Query: 241 HLFQESQHPYTKGLIGASI 259
            +F   +  YT+ L+ AS+
Sbjct: 502 EVFDTPRQAYTRALLAASL 520