Pairwise Alignments

Query, 555 a.a., ABC transporter, nucleotide binding/ATPase protein (peptide) from Agrobacterium fabrum C58

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  439 bits (1129), Expect = e-127
 Identities = 248/558 (44%), Positives = 344/558 (61%), Gaps = 39/558 (6%)

Query: 5   LLGVRDLSVRYHSRSGEAVAVENLSFDIAAGEAVALVGESGCGKSTTALALSNLL--PDE 62
           LL V+DL+V + S  G   A   +SF + AGE + ++GESG GKS +A A+  L+  P  
Sbjct: 6   LLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPG 65

Query: 63  ASSSGEVTFDGLDLFRLPPKAWRPILGPRIGMIFQEPMSALNPVYTVGDQIAEVLHAHER 122
              +G V + G DL  L     R + G RI MIFQ+P+S LNPVYT+G Q+ EV   H  
Sbjct: 66  DICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGV 125

Query: 123 LSRKAARSRVLELLDLVSMPEPHRRIASYPHELSGGQRQRAMIAQAIALTPLLLIADEPT 182
            S   AR R +E+L  V +PEP +RI  YPH+ SGGQRQR MI  AIAL P +LIADEPT
Sbjct: 126 ASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPT 185

Query: 183 TALDSTIQSQILELIDRLRRDLSMGLLLISHDLTLVSRWTDRVVVMHNGKRMEELKAEHL 242
           TALD ++Q+QILEL+ +L+ +  + +++I+HDL + +   DRV+VM +G+ +EE +A  +
Sbjct: 186 TALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAV 245

Query: 243 FQESQHPYTKGLIGASIRLGDGRHASSERLNEIRTHRNSNGTTSFEIRSPPVAAEPRTNA 302
           F+   H YT+ LI A     D                          R+PP  A P    
Sbjct: 246 FENPAHSYTRTLINALPHADD--------------------------RAPPRPARP---- 275

Query: 303 TADALLEVEDLTVRYDPAS------KTPPAVDRVTFELLRGETLGLVGESGSGKSSLSKA 356
               +LEV+++   Y  +S          AV  ++F++  GET+G+VGESGSGKS++++ 
Sbjct: 276 AGKPILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARV 335

Query: 357 LSRLIPVAGGQILFEGQDITHAGGADLRAFRGRVQMIFQDPYSSLNPRRTVGDILDSVLH 416
           L  L   +GG+ LF G+D+       L AFR +VQM+FQDPYSS+NPR TV DI+     
Sbjct: 336 LLGLNEASGGEALFHGRDVLKMDRKQLLAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWR 395

Query: 417 AHKYRNSADR-QSRISEALDQVRLPRSAVERFPHEFSGGQRQRIAIARALIVRPSLVICD 475
            HK      R + R++E L  V L     +R+PH+FSGGQRQRIAIARAL   P LV+CD
Sbjct: 396 IHKDILEKTRWRDRVTELLGLVGLNPEHAKRYPHQFSGGQRQRIAIARALACDPELVVCD 455

Query: 476 EPVSALDVSVQAQILNLLADLKEEAGLSYLFISHDLAVVKYISDRIMVMKDGHIIERGNH 535
           E VSALDVSVQ Q+++LLA+L++  GL+Y+FI+HDL +V++ +DRI+VMK G I+E    
Sbjct: 456 EAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATT 515

Query: 536 QNLWSNPSHEYTRKLIAA 553
           + ++ NP H YTR+LI A
Sbjct: 516 EEIFRNPQHAYTRQLINA 533



 Score =  201 bits (512), Expect = 5e-56
 Identities = 113/259 (43%), Positives = 159/259 (61%), Gaps = 8/259 (3%)

Query: 303 TADALLEVEDLTVRYDPASKTPPAVDRVTFELLRGETLGLVGESGSGKSSLSKALSRLI- 361
           T   LLEV+DLTV +        A   V+F +  GETL ++GESGSGKS  + A+  LI 
Sbjct: 2   TGPHLLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLID 61

Query: 362 ----PVAGGQILFEGQDITHAGGADLRAFRG-RVQMIFQDPYSSLNPRRTVGDILDSVLH 416
                +  G + + G+D++     + R   G R+ MIFQDP S LNP  T+G  L+ V  
Sbjct: 62  TPPGDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFT 121

Query: 417 AHKYRNSADRQSRISEALDQVRL--PRSAVERFPHEFSGGQRQRIAIARALIVRPSLVIC 474
            H   + A+ + R  E L +V +  P   ++++PH+FSGGQRQRI I  A+ +RP ++I 
Sbjct: 122 VHGVASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIA 181

Query: 475 DEPVSALDVSVQAQILNLLADLKEEAGLSYLFISHDLAVVKYISDRIMVMKDGHIIERGN 534
           DEP +ALDVSVQAQIL LL  L+ E GL+ + I+HDL V   ++DR++VMK G I+E G 
Sbjct: 182 DEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGE 241

Query: 535 HQNLWSNPSHEYTRKLIAA 553
            + ++ NP+H YTR LI A
Sbjct: 242 ARAVFENPAHSYTRTLINA 260



 Score =  182 bits (462), Expect = 3e-50
 Identities = 107/265 (40%), Positives = 158/265 (59%), Gaps = 19/265 (7%)

Query: 4   PLLGVRDLSVRYHSRSG------EAVAVENLSFDIAAGEAVALVGESGCGKSTTALALSN 57
           P+L V+++   Y   SG         AV+NLSFD+AAGE + +VGESG GKST A  L  
Sbjct: 279 PILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLG 338

Query: 58  LLPDEASSSGEVTFDGLDLFRLPPK---AWRPILGPRIGMIFQEPMSALNPVYTVGDQIA 114
           L     +S GE  F G D+ ++  K   A+R     ++ M+FQ+P S++NP  TV D ++
Sbjct: 339 L---NEASGGEALFHGRDVLKMDRKQLLAFRR----KVQMVFQDPYSSMNPRMTVFDIVS 391

Query: 115 EVLHAHERLSRKAA-RSRVLELLDLVSMPEPHRRIASYPHELSGGQRQRAMIAQAIALTP 173
           E    H+ +  K   R RV ELL LV +   H +   YPH+ SGGQRQR  IA+A+A  P
Sbjct: 392 EPWRIHKDILEKTRWRDRVTELLGLVGLNPEHAK--RYPHQFSGGQRQRIAIARALACDP 449

Query: 174 LLLIADEPTTALDSTIQSQILELIDRLRRDLSMGLLLISHDLTLVSRWTDRVVVMHNGKR 233
            L++ DE  +ALD ++Q Q+++L+  LR  L +  + I+HDL +V  + DR++VM +G+ 
Sbjct: 450 ELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEI 509

Query: 234 MEELKAEHLFQESQHPYTKGLIGAS 258
           +E    E +F+  QH YT+ LI A+
Sbjct: 510 VEHATTEEIFRNPQHAYTRQLINAT 534