Pairwise Alignments

Query, 531 a.a., ABC transporter, substrate binding protein (peptide) from Agrobacterium fabrum C58

Subject, 582 a.a., peptide ABC transporter substrate-binding protein from Synechocystis sp000284455 PCC 6803

 Score =  130 bits (326), Expect = 2e-34
 Identities = 136/535 (25%), Positives = 225/535 (42%), Gaps = 59/535 (11%)

Query: 18  LGTAIPGISFAQTTPVRGG---------TARIVAASEPAMLIELFQNTGNAGVGSRV-IE 67
           +G  +P + FA  +P  G          T +I++   P +L             SR+ +E
Sbjct: 18  IGGLLPLLLFACGSPNVGNGNSQQNGQETLKILSWQAPTILNPHLATGFKDAEASRIALE 77

Query: 68  GLLKVSFDRTFKPHLA------ESWDISADGKTYTFHLRPGIKWHDGQPFTSADVAFS-- 119
            L     +    P LA      E+  ++ADG + T+ L+P + W DGQPF++ DVAF+  
Sbjct: 78  PLASFDQEGNLVPFLAAEIPSVENGGVAADGLSVTWKLKPDVLWSDGQPFSAEDVAFTYK 137

Query: 120 LLTLKETHPRRRVTFASLEKIDTPDPLTVVAQFKTPVPFLLPALSGIASPIIPKHLYEE- 178
            L+  +T      T+ ++ K++  D  TV   FK P P       G    I+P+H+Y++ 
Sbjct: 138 FLSDPKTGATSTGTYEAIAKVEALDKNTVKITFKEPNPAWFLPFVGSEGMILPQHIYKDF 197

Query: 179 --TDIRANPYNAKPIGTGPYVFKEWERGSHILLERNPDYW-IKDLPLLDAVVTRFIVDVS 235
                R  P N  PIGTGPY    ++ G  +L E NP Y   K++      +       S
Sbjct: 198 VGEKARQAPANLLPIGTGPYRVTSFKPGDVVLYEVNPHYRDRKNIGFQQVEIKGGGDATS 257

Query: 236 ARGAAFEAGDVDVGYHTPVPLDEIKRLGDDPRFGVETRGYELEGSLNQLFFRLD------ 289
           A  A  + GD D   +  V  + ++ L    +  +     +L     ++ F L       
Sbjct: 258 AARAVLQTGDADFALNLQVEDNILQSLAQGGKGEIVA---DLGSLSERVIFNLSDPDPAR 314

Query: 290 -----------HPILSDLRVRQAFAHAINIDDYIRLVWKGYAVPSPTAIAPSMAEYHDPS 338
                      HP L D  VR+A    I+ D   + ++       PTA    + + +   
Sbjct: 315 TNGDRSSVKFPHPFLQDPLVRKAITLGIDRDLIAKQLYG--VTGQPTANVLVLPQQYASQ 372

Query: 339 IGFYAFDKAKAEALLDEAGHK-RGGDGKR----FALRLTYNPVYGPTRVGA-EFLRSAFG 392
              + F+  +A+ LLD+AG K   G+G R      L++ +     P R    + ++    
Sbjct: 373 NTSFQFNPTEAQQLLDQAGWKDSNGNGIRDKDGIELQMVFQTSVNPLRQKTQQVIKQTLQ 432

Query: 393 DIGVDVAIQSYDYATYIK----SVYTDAAFDIDLQHLANGY---DPTDGIQRGYWSKNIK 445
            IGV V ++S D + +      +  T   F  DL     G    DP+  +Q         
Sbjct: 433 AIGVGVELKSIDPSVFFSGDPANPDTLERFQGDLSMFTTGNTNPDPSKYMQTFTCGAIPT 492

Query: 446 KGVPWS--NHSGYSNAEVDEIFEKGSIEIDPAKRKEYFVRFQHILHRDLPAVNLV 498
               WS  N+  Y +AE D++++K   E+DP KR++ F++   +L  D   V +V
Sbjct: 493 AENQWSGDNYGRYCSAEYDQLWQKAVAELDPEKRQQLFIQMNDLLVDDYILVPVV 547