Pairwise Alignments

Query, 528 a.a., ABC transporter, nucleotide binding/ATPase protein (ribose) from Agrobacterium fabrum C58

Subject, 503 a.a., ribose import ATP-binding protein RbsA from Phaeobacter inhibens DSM 17395

 Score =  265 bits (678), Expect = 2e-75
 Identities = 169/524 (32%), Positives = 286/524 (54%), Gaps = 28/524 (5%)

Query: 5   ILSVESLTHSFGPSPALRDINLAIRSGEVVGIVGENGAGKSTLLNVLSGTLKPSRGTVAI 64
           +L +E +  +F    AL  ++L I  GEV  ++GENGAGKSTL+ VL G  +P  G + +
Sbjct: 7   VLRLEGIVKTFPGVRALDGVSLTILPGEVHALMGENGAGKSTLMKVLGGIHQPDEGQIIV 66

Query: 65  GGTPVALENYYEANQRGIWRIFQDPALIGALPVYESLFLGHEKRFTRFGVLNKAKMIDIA 124
              PV +    +A  +GI  I Q+ +L   L V E+++LG   R  RFG+++ A++    
Sbjct: 67  AEQPVVMSGPLDAKAKGIVFIHQELSLADELSVAENIYLGELPR-KRFGLVDWAELEAKT 125

Query: 125 RDLVRSMGIAVDVKHLMLNYDFATRQSLEVCRAILLPKVLGLPSGFVLFDEPTTGLSRAE 184
             ++  + +  + K  + +   A +Q +E+ RA      L + +  V+FDEPT  L+ AE
Sbjct: 126 NAILEKLKVGFNAKTRVGDLSIANQQMVEIARA------LTVDAKAVIFDEPTASLTDAE 179

Query: 185 VVRLLESMGRLRRQGAGVAFVSHRLQEVFDVCDRLIVLKDGAIVGEGPISQFDEAGLHRL 244
            V L E +  L+ QG G+A++SHR++E+F + DR+ VL+DG   G    ++ +E  + ++
Sbjct: 180 KVVLFEVISDLQEQGVGIAYISHRMEEIFKITDRISVLRDGQYQGTVNTAETNEENVTQM 239

Query: 245 MVGRAFESTTPGKRSTLNEEPFLVVKGLSRSSRPSAGQRLTHLTDISFNVGKGEIVGIGG 304
           M+GR  + +       L E   L V+GLS  S            D++F V +GE+VG  G
Sbjct: 240 MIGRKLDLSRNEAHHELGEVA-LEVRGLSCGSL---------FEDVNFEVRRGEVVGFYG 289

Query: 305 LLGSGKGQLLRVLAGVTSHRDGTVELGGMPLA-GSIAQRKQKGIAFIPGDRSNEAVVVTA 363
           L+G+G+ ++   L G+ +   G++ L G  +A  S     ++GI+ +P DR  + +V+  
Sbjct: 290 LVGAGRTEIAETLFGLRNPTSGSIFLDGAEVAITSPHDAIERGISLVPEDRKGQGLVLGM 349

Query: 364 DVASNISLPSGHAGARGFSNAFGIWRSAREQNVARQMIVSLRIKAVSGQPLRTLSGGNQQ 423
           +   N++LP       G   A G   +  +Q   +  I +   K + G     LSGGNQQ
Sbjct: 350 NCRDNMTLPQVDDLKAGPFVADGAEIAIFDQYRDKLDIRTPGWKQLVGN----LSGGNQQ 405

Query: 424 KVSLARWIHREPVLLLIENPTAGVDVGAKREIYALLRDLTAHGTSILYVTDDLPELISLS 483
           K+ + +W+   P +L+++ PT G+DVG+K EI+ LLRDL A G +++ ++ ++PE++ ++
Sbjct: 406 KIVIGKWLSMRPNVLIVDEPTRGIDVGSKAEIHNLLRDLAAQGYAVIVISSEMPEVLHVA 465

Query: 484 DRILIMRDGRIVSDIDNRQTLTTEHALVADMIGPASNEKTPIVA 527
           DRI+ M  GRI+      +T T+E     ++I   S   T  VA
Sbjct: 466 DRIVAMYSGRIM------RTFTSEEVTEENLIAAISGLDTEKVA 503