Pairwise Alignments

Query, 313 a.a., ABC transporter, membrane spanning protein (nitrate/sulfonates) from Agrobacterium fabrum C58

Subject, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score =  186 bits (471), Expect = 6e-52
 Identities = 91/223 (40%), Positives = 145/223 (65%), Gaps = 5/223 (2%)

Query: 90  PVLLPAPSTIVRTIWNMTL----SGELAEHVAVSSARVLQGFGIAAVLALALGIVMGLIG 145
           PV+LP   +++  + N  +    +G L E+  VS  RVL GF IA   A+ LG++MG   
Sbjct: 27  PVILPKVESVISILLNPGVGILGTGNLIENTIVSIKRVLIGFFIAGAFAIPLGLLMGYYS 86

Query: 146 PLNRLADLMVQVLKPIPPIAWIPLSILWFGIGEEAKIFIIVLGAFFPILVSTLDAVHQTD 205
            +N L D  V++L+PIPP+AW+PL++ WFGIGE +  FII +GAFFPIL++T+  V    
Sbjct: 87  LINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSMHFIIFIGAFFPILINTISGVKSVP 146

Query: 206 VRYVELARVLEVPRLNFIRQVMIPGALPQIMSGLRLGITMSWMCVVAAELIAAS-SGIGF 264
           V  +E A+ L     + ++ V++P + P I++GLR+G  ++WMCVVAAE++  S +G+G+
Sbjct: 147 VIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRVGAGIAWMCVVAAEMLPGSDAGLGY 206

Query: 265 LIMDGRVMSNASVVLAGMITLGVLGKLTDDALRFAERRLVRWR 307
           LIM    +S  ++V+A MI +G++G + D  LR+ E++   W+
Sbjct: 207 LIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYIEKKYFCWK 249