Pairwise Alignments

Query, 370 a.a., replication protein from Agrobacterium fabrum C58

Subject, 333 a.a., RepB2 replication protein from Sinorhizobium meliloti 1021

 Score =  162 bits (410), Expect = 1e-44
 Identities = 110/329 (33%), Positives = 167/329 (50%), Gaps = 6/329 (1%)

Query: 35  MSRKDAIDTLFLKKQPATDRAAVDKSTARVRTGAISAMGSSLQEMAEGAKAAARLQDQLA 94
           MSRKD+   LF       + +A      R  +  +  + + +++M E ++ A RL   L 
Sbjct: 1   MSRKDS-KGLFANVLGQLENSAEKGGMQRSTSPHLLKVAAGVRQMQERSELAERL---LK 56

Query: 95  TGEAVVSLDPSMIDGSPIADRLPSDV-DPKFEQLEASISQEGQQVPVLVRPHPEAAGRYQ 153
            G  +V +DP  I  S I DR  S   +     L  S+ + GQ  P LVRP   AA  +Q
Sbjct: 57  DGGQIVEIDPDEIMESAIRDRFDSGYSEAGIADLLESMREHGQSTPGLVRPVRGAARPFQ 116

Query: 154 IVYGRRRLRAAVNLRREVSAIVRNLTDCELVVAQGRENLNRADLSFIEKALFALRLEDAG 213
           IV+GRRRL AA  L  +  AI R L+D + +V QG EN NR DLSFIE+ LFA   E AG
Sbjct: 117 IVFGRRRLAAAKLLGIKFKAIARELSDEDAIVLQGEENSNRKDLSFIERCLFAQSQEAAG 176

Query: 214 FDRATIIAALSTDKADLSRYITVARGIPLNLATQIGPASKAGRSRWVVL-AEGLGKPKAT 272
           + R  I  +LST ++ +S  I +A  +P  +  QIGPA + GR RW+          +  
Sbjct: 177 YRRDVICKSLSTGRSHISEMIRIAAALPREILMQIGPAPEIGRRRWIEFEVRWAAHREPA 236

Query: 273 DAIEAMLGSEQFKQSDSDTRFNLIFNAVSRPPAKTPKKVRAWSTPKGKKAATIRQETGRT 332
              + +L  EQ + S SD RF  +F A+++   +      +     G     I++     
Sbjct: 237 KVAQLVLEQEQIQASSSDLRFTAVFEALTKVDVRAAASSTSDLISHGLVLGQIQRGKSAA 296

Query: 333 ALVFDERLVPTFGEYVADQLDSLYAQFIE 361
            L F++ +   F +++A Q++SL+ QF++
Sbjct: 297 KLTFNKSVPSGFVDFIAGQIESLHDQFMQ 325