Pairwise Alignments

Query, 323 a.a., conjugal transfer protein from Agrobacterium fabrum C58

Subject, 549 a.a., Flp pilus assembly complex ATPase component TadA from Methanococcus maripaludis S2

 Score =  108 bits (269), Expect = 4e-28
 Identities = 89/307 (28%), Positives = 145/307 (47%), Gaps = 27/307 (8%)

Query: 24  VALDDATVVEIMLNP-DGKLFIERLGHGVAPAGL-LSPAAAEVIIGSVAHALQSEADDEQ 81
           + L+D+ + E+M+N  +   F+    + +    + L    A  ++ S+A+      D   
Sbjct: 172 IPLNDSKLEEVMVNGVESPSFVFHRKYQMCETNIRLDRHEATRVVESIAYLAGRTIDSRT 231

Query: 82  PIISGELPIGGHRFEGLLPPVVSGPSFTIRRRASRLIPLDDYVKHKIMTAAQVSVLRSAI 141
           P++   LP G      +    + G + TIR+ +   + + D +          + L  A+
Sbjct: 232 PMLDAFLPDGSRVNATMSDVTLGGNTITIRKFSEDPLTIVDLINFGTFDLELAAFLWQAV 291

Query: 142 -----ASRMNIVISGGTGSGKTTLANAVIAEIVANAPDDRIVILEDTAEIQCAAENAVAL 196
                A   N +I GGTGSGKTT  N V    + +   DR+V +EDT E+Q    + + +
Sbjct: 292 EGYFGAKPANTLIVGGTGSGKTTTLNVVS---MFSMYTDRLVTIEDTPELQVPLTHLIKM 348

Query: 197 HTSD--------TIDMARLLKSTMRLRPDRIIVGEVRDGAALTLLKAWNTGHPGGVTTIH 248
            T           I M  L+K+++R+RPDRI VGEVR   A +LL A NTGH G   T+H
Sbjct: 349 ITRPGRPGIQGYEITMDDLIKNSLRMRPDRIFVGEVRGSEAHSLLVAMNTGHDGCSGTLH 408

Query: 249 SNTAMSALRRLEQLTAEVSQQPMQEVIGEAVDLIVSIERTGKG----RRVREVIHVEGFA 304
           +N+A  AL RL      V      +V+  +VD I++ +R  +     RR+  V+ + G  
Sbjct: 409 ANSADEALIRLINPPMNV-----PKVMMSSVDFIINQQRIKRNKKTVRRILGVVEIGGSG 463

Query: 305 NARYRTE 311
               +TE
Sbjct: 464 ENITKTE 470