Pairwise Alignments

Query, 283 a.a., ABC transporter, substrate binding protein (nopaline) from Agrobacterium fabrum C58

Subject, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  120 bits (301), Expect = 3e-32
 Identities = 78/269 (28%), Positives = 132/269 (49%), Gaps = 32/269 (11%)

Query: 9   LAAVVTGVLLAAGPTQAKDYKSITIATEGSYAPYNFKDAGGKLIGFDIDLGNDLCKRMNI 68
           L A + G++ A+   Q    + I    E +YAP+ + D   ++ GFD+DL N LCK++  
Sbjct: 5   LLASLIGLVSASAAAQ----QEIKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQLEA 60

Query: 69  ECKFVEQAWDGIIPSLTAGRYDAIMAAMGIQPAREKVIAFSRPYLLTPMTFLTTADSPLL 128
           +C F  QA+D +IP+L   RYDA ++AM I  AR + + FS PY      F++ A    +
Sbjct: 61  KCSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLAGK--V 118

Query: 129 KTQVAIENLPLDNITPEQKAELDKFTKIFEGVKFGVQAGTSHEAFMKQMMPSVQISTYDT 188
             Q A+                       +G + GVQ G++H++F+ + +  V    Y +
Sbjct: 119 ADQAAL-----------------------KGKRVGVQNGSTHQSFLLEQLSDVVAVPYSS 155

Query: 189 IDNVVMDLKAGRIDASLASVSFLKPLTDKPDNKDLKMFGPRMTGG-LFGKGVGVGIRKED 247
             +  +D+K GRID+     + +     K DN +L   G R+T    FG G G+ + K++
Sbjct: 156 YQDAFIDMKNGRIDSVFGDTAVVAEWF-KGDN-NLAYVGERVTNAQYFGNGFGIAVNKDN 213

Query: 248 ADLKALFDKAIDAAIADGTVQKLSQQWFG 276
             L    + A++A   +G    +  ++FG
Sbjct: 214 QALLDQLNAALEAVKENGEYAAIFNKYFG 242