Pairwise Alignments

Query, 283 a.a., ABC transporter, substrate binding protein (nopaline) from Agrobacterium fabrum C58

Subject, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  164 bits (414), Expect = 2e-45
 Identities = 98/276 (35%), Positives = 145/276 (52%), Gaps = 29/276 (10%)

Query: 6   LNALAAVVTGVLLAAGPTQAKDYKSITIATEGSYAPYNFKDAGGKLIGFDIDLGNDLCKR 65
           L A A + T +   +G TQAK++K++    EG+Y P+++ +A G L GFD+D+ N LC  
Sbjct: 7   LVATALIATTI---SGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCAE 63

Query: 66  MNIECKFVEQAWDGIIPSLTAGRYDAIMAAMGIQPAREKVIAFSRPYLLTPMTFLTTADS 125
           M +ECK V Q WDGIIPSL A +YDAI+AAM I   R+K + F+  Y   P  F+    +
Sbjct: 64  MQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKGA 123

Query: 126 PLLKTQVAIENLPLDNITPEQKAELDKFTKIFEGVKFGVQAGTSHEAFMKQMM-PSVQIS 184
            L  T+  +                       +GVK GVQ  T+H+ ++      +V I 
Sbjct: 124 DLAFTKEGL-----------------------KGVKIGVQRATTHDKYITDNYGDTVDIV 160

Query: 185 TYDTIDNVVMDLKAGRIDASLASVSFLKP-LTDKPDNKDLKMFGPRMTG-GLFGKGVGVG 242
            Y + D   +DL  GRI A L   S L+  + +KP     +  GP +T    FG+G+G+ 
Sbjct: 161 RYGSFDEAYLDLANGRIAAVLGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIA 220

Query: 243 IRKEDADLKALFDKAIDAAIADGTVQKLSQQWFGYD 278
           +RK+D +L    D AI A    G  Q++  ++F YD
Sbjct: 221 VRKQDKELTEKLDAAITALREKGIYQQIQAKYFKYD 256