Pairwise Alignments

Query, 283 a.a., ABC transporter, substrate binding protein (nopaline) from Agrobacterium fabrum C58

Subject, 258 a.a., amino acid uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  154 bits (388), Expect = 3e-42
 Identities = 93/273 (34%), Positives = 144/273 (52%), Gaps = 28/273 (10%)

Query: 9   LAAVVTGVLLAAGPTQAKDYKSITIATEGSYAPYNFKDAGGKLIGFDIDLGNDLCKRMNI 68
           LA  + G  L++    A+  K   I TEG+Y P+NF D+ GK+ GFD+++G  LC+RM +
Sbjct: 6   LALALAGTALSSSAVAAEKLK---IGTEGAYPPFNFVDSSGKIGGFDVEIGLALCERMKV 62

Query: 69  ECKFVEQAWDGIIPSLTAGRYDAIMAAMGIQPAREKVIAFSRPYLLTPMTFLTTADSPLL 128
           EC+ V Q WDGIIP L A +YD I+A+M I   R+K +AF+ PY L  MT      + + 
Sbjct: 63  ECEVVAQDWDGIIPGLLAKKYDMIIASMFITEERKKQVAFTNPYYLAAMTHAAPKGAGIS 122

Query: 129 KTQVAIENLPLDNITPEQKAELDKFTKIFEGVKFGVQAGTSHEAFMKQMMPSVQISTYDT 188
               A  N  L                  +G   G Q+GT+   ++  + P  +I  Y T
Sbjct: 123 ----AFSNEAL------------------QGKVIGAQSGTTQADYIAAVYPDAEIKLYPT 160

Query: 189 IDNVVMDLKAGRIDASLASV-SFLKPLTDKPDNKDL-KMFGPRMTGGLF-GKGVGVGIRK 245
            D   +D+  GR+D  +  +   L  +T   D K   ++ G  +T   F G GVG+ +R+
Sbjct: 161 QDEANLDMVNGRLDLQVGDMLPLLDWVTKNDDGKGCCELVGEPITDKKFVGDGVGIAVRQ 220

Query: 246 EDADLKALFDKAIDAAIADGTVQKLSQQWFGYD 278
           ED +++   +KA+D   ADGT +K++ ++F  D
Sbjct: 221 EDNEMREKLNKALDEIRADGTYKKINDKYFTID 253