Pairwise Alignments

Query, 236 a.a., ABC transporter, membrane spanning protein (nopaline) from Agrobacterium fabrum C58

Subject, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  170 bits (430), Expect = 3e-47
 Identities = 92/234 (39%), Positives = 137/234 (58%), Gaps = 25/234 (10%)

Query: 12  GWGDELARGAMMTVVVAACSYFFGIIFGSLFAAAKLSRFWSLRLLGDVYTTVVRGVPELL 71
           G+   + +GA++T+ VA  S    ++ G L A AK++ +   R +  +YTT++RG+P+L+
Sbjct: 6   GYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDLV 65

Query: 72  IIFLVFFGGGTLLRTIANGLFGYE---------------------GYIEPPIFVIGVLCI 110
           ++ L+FFGG  LL    NGL  +                       Y++   FV GVL I
Sbjct: 66  LMMLIFFGGQILLN---NGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTI 122

Query: 111 SVSAGAYATEVIRAAVLAVPPGQIEAAKSIGMGPWLRLRRVLIPQAARFALPGLGNVWQF 170
               GAY  E  R A+LAV  G++EAAK+ GM   +  RR+L+PQ  R A+PG GN W  
Sbjct: 123 GFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLV 182

Query: 171 TLKDTSLISVVGLVEIMRTAAMGAGSTKQPFTFYITAFVIFLLLSSVSNRGFLK 224
            LK T+L+S++GL +++R +++ AGSTK PFTFY+   +IFL  +SVS  G LK
Sbjct: 183 LLKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVST-GLLK 235