Pairwise Alignments

Query, 241 a.a., ABC transporter, membrane spanning protein (nopaline) from Agrobacterium fabrum C58

Subject, 222 a.a., arginine transporter permease subunit ArtM from Vibrio cholerae E7946 ATCC 55056

 Score =  166 bits (419), Expect = 5e-46
 Identities = 84/201 (41%), Positives = 133/201 (66%), Gaps = 2/201 (0%)

Query: 12  KLLAAVPTTLTLAFISLLIGFVVSVPVALMRLSKNRIVSSLAYGYVYIIRSTPLLVQMFL 71
           +LL  + T+L L   SLL+G ++S+ + +  + +  +V   +   + +   TPLLVQ+FL
Sbjct: 8   QLLEGLGTSLQLTAASLLVGCILSLLMTVSLVMRTPVVHWFSRAVITLFTGTPLLVQIFL 67

Query: 72  IYYGSAQFRGVLSEVGLWSSFREPWFCAILALALNTAAYTSEIIRGGIQSVSLGQIEAAR 131
           +YYG  QF  +   V LW    +PWFCA+LALALNTAAY++++ +G   ++  GQ +A R
Sbjct: 68  VYYGPGQFEWIRESV-LWVWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIPSGQWQACR 126

Query: 132 AVGMSTFLQFRRIVFPIAIRQALPAYGNEVMLIIKSTSLASTITIVEVTGLAKQIISATY 191
           A+GM+     R ++ P A+R+A+PAY NEV+L+ K TSLASTITI+++ G A++I + TY
Sbjct: 127 ALGMNKIATLR-VLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYAQRINAQTY 185

Query: 192 SPVEVFIVAGAIYLFITFVVS 212
             + VF +AGA YL +  +++
Sbjct: 186 DTLTVFGIAGAFYLAVNGILT 206