Pairwise Alignments

Query, 241 a.a., ABC transporter, membrane spanning protein (nopaline) from Agrobacterium fabrum C58

Subject, 276 a.a., L-lysine ABC transporter, permease component 2 (from data) from Sinorhizobium meliloti 1021

 Score =  176 bits (447), Expect = 3e-49
 Identities = 91/217 (41%), Positives = 137/217 (63%), Gaps = 1/217 (0%)

Query: 11  PKLLAAVPTTLTLAFISLLIGFVVSVPVALMRLSKNRIVSSLAYGYVYIIRSTPLLVQMF 70
           P  L+ +  TLTL   S+L+G V+S+PVAL R+SKNR+   LAY YVY  R TPL+ Q+F
Sbjct: 60  PSFLSGLGVTLTLVISSILMGAVLSLPVALGRMSKNRLWGWLAYAYVYFFRGTPLITQLF 119

Query: 71  LIYYGSAQFRGVLSEVGLWSSFREPWFCAILALALNTAAYTSEIIRGGIQSVSLGQIEAA 130
           LIYYG   FR  L  VGLW  FR+ W CA+    LNTAAY +EI+RG I+SV  GQ E A
Sbjct: 120 LIYYGLGSFRPQLETVGLWWFFRDAWNCALFTFTLNTAAYQAEILRGAIESVPRGQREGA 179

Query: 131 RAVGMSTFLQFRRIVFPIAIRQALPAYGNEVMLIIKSTSLASTITIVEVTGLAKQIISAT 190
            A+G+   + F +++ P A+  AL  YGNE++L+IK +++ + +T+ ++ G  ++  S T
Sbjct: 180 AALGLPERVAFFKVILPQAMIVALRPYGNEIILMIKGSAIVAIVTVFDLMGETRRAFSRT 239

Query: 191 YSPVEVFIVAGAIYLFITFVVSRLVMLAEWWLNPHMR 227
           +   +++I A  +YL +  ++  +    E  L  H++
Sbjct: 240 FD-YQMYIWAAILYLLMVELLRNIWGWLEARLTRHLK 275