Pairwise Alignments

Query, 241 a.a., ABC transporter, membrane spanning protein (nopaline) from Agrobacterium fabrum C58

Subject, 250 a.a., L-histidine ABC transporter, permease component 2 (from data) from Burkholderia phytofirmans PsJN

 Score =  229 bits (584), Expect = 4e-65
 Identities = 115/227 (50%), Positives = 162/227 (71%), Gaps = 1/227 (0%)

Query: 2   DIQLIIESFPKLLAAVPTTLTLAFISLLIGFVVSVPVALMRLSKNRIVSSLAYGYVYIIR 61
           D   + ++  +LLAAVPTTL L F SL++G ++S+ +  MR+S + + +  A  Y+ + R
Sbjct: 4   DFDFLFDTIKQLLAAVPTTLGLFFCSLILGGLLSLVIVTMRVSPHWLPNRFARAYILVFR 63

Query: 62  STPLLVQMFLIYYGSAQFRGVLSEVGLWSSFREPWFCAILALALNTAAYTSEIIRGGIQS 121
            +PLL+QMFL+YYG  QF GV+ E  LW   REP+ CA+L+LAL TA YT+EIIRGG+ +
Sbjct: 64  GSPLLIQMFLVYYGMGQF-GVIRESFLWPVLREPYMCAVLSLALCTAGYTAEIIRGGLMA 122

Query: 122 VSLGQIEAARAVGMSTFLQFRRIVFPIAIRQALPAYGNEVMLIIKSTSLASTITIVEVTG 181
           V +GQIEA  ++G+S F   RR++ PIA+RQ LPAY  E +L++KST+LAS +T+ EVTG
Sbjct: 123 VPVGQIEAGYSIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTG 182

Query: 182 LAKQIISATYSPVEVFIVAGAIYLFITFVVSRLVMLAEWWLNPHMRA 228
           +A+QII  TY   EVFI A  IYLF+ FV+ RL+ + E  L+ H+RA
Sbjct: 183 VAQQIIQQTYRTTEVFICAALIYLFLNFVIVRLLGMLETRLSRHLRA 229