Pairwise Alignments

Query, 241 a.a., ABC transporter, membrane spanning protein (nopaline) from Agrobacterium fabrum C58

Subject, 237 a.a., histidine/lysine/arginine/ornithine ABC transporter permease HisM from Burkholderia phytofirmans PsJN

 Score =  161 bits (407), Expect = 1e-44
 Identities = 84/206 (40%), Positives = 128/206 (62%)

Query: 14  LAAVPTTLTLAFISLLIGFVVSVPVALMRLSKNRIVSSLAYGYVYIIRSTPLLVQMFLIY 73
           L  V  TL L  +S+ +GF +S+P+A+ R+SK + +S L + Y Y+ R TPL VQ+ L Y
Sbjct: 20  LTGVVITLWLLVVSIGLGFCLSIPLAVARVSKKKWLSRLVWLYTYVFRGTPLYVQLLLCY 79

Query: 74  YGSAQFRGVLSEVGLWSSFREPWFCAILALALNTAAYTSEIIRGGIQSVSLGQIEAARAV 133
            G      + +     + FR+   C +LA  LNT AYT+EI  G I++   G+IEAARA 
Sbjct: 80  TGLYSLEIIRNHELTNAFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATPYGEIEAARAY 139

Query: 134 GMSTFLQFRRIVFPIAIRQALPAYGNEVMLIIKSTSLASTITIVEVTGLAKQIISATYSP 193
           GMS+F  +RR++ P A+R+ALP Y NEV+L++ +T++A T T+ ++  +A+ + SATY  
Sbjct: 140 GMSSFTLYRRVILPSALRRALPYYSNEVILMLHATTVAFTATVPDILKIARDVNSATYQS 199

Query: 194 VEVFIVAGAIYLFITFVVSRLVMLAE 219
              F +A  +YL I+F +  L   AE
Sbjct: 200 FNAFGIAALLYLCISFALVWLFRRAE 225