Pairwise Alignments

Query, 649 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 686 a.a., Predicted membrane protein from Pseudomonas stutzeri RCH2

 Score =  230 bits (587), Expect = 1e-64
 Identities = 197/670 (29%), Positives = 310/670 (46%), Gaps = 45/670 (6%)

Query: 1   MLAYLIAISFDLDRPYWAVATVYIVAHPLSGAISSKSVFRLLGTLVGSFATLIMVPNLVN 60
           +LA  IA++  L+ PYWA+A+VY+V+HPLSGA  SK+++R LGTL+G+ A+++++P    
Sbjct: 18  LLALFIALAIPLENPYWAMASVYVVSHPLSGATRSKAIYRALGTLLGAAASVVLLPTFAQ 77

Query: 61  EPILLSGAIVLWVAACTFISLLDRTPRSYVSLLAGYTVLLAGLPLVSAPANTFDTVVSRV 120
           +P++LS AI LW+ A  F+SLLDR+PRSY+ LLA YTV L  L  V+ P+  FD  ++R 
Sbjct: 78  QPLMLSLAISLWIGALLFLSLLDRSPRSYIFLLAAYTVPLISLAEVNHPSTIFDVALARS 137

Query: 121 EEIGLAIICASVVSHIVFPVHVGAVLISRIDGWM-DRARTLLEATAAGKLSETQSRVERH 179
           EEI L I+CASVV+ ++FP  +   L +++   + D    +        L E   R   +
Sbjct: 138 EEILLGIVCASVVNAVLFPSRIAPTLAAKMHLLLRDGRGAVSRMLNTQHLGEADQRA-LN 196

Query: 180 ALAADAADLRSFNLHLQYDGSRYRWAVSLVRSMQYRMAAFLP-LLSEMEDLRRSLGKLNT 238
           AL  D   L +   HL +D S +   V   R  + RMA  +P L+S  + L R   +L  
Sbjct: 197 ALLVDVMGLDAMISHLGHDSSSHLSTVH-AREFRARMAMLMPQLISTADSLHRLQAEL-- 253

Query: 239 SGATQALA---------IITDAASHTRGSAEILDSRIDALTS-ATTRHTWEKLLLANAAR 288
            G    L          I +DA +   G  E L  R   L +     H    L + +  R
Sbjct: 254 QGLLPELVDYLQQVDRWIQSDAEA---GHGEHLRERSLQLAAWLGDSHPAHALAIDSGLR 310

Query: 289 TVRNILRLADECRALLKSM-EGENNARVVRVPHRRR----AQHRDIGMALLSSLTVAVCL 343
            +  ++ L  +C  L +   EG   A      H ++     +H D G+   ++ +VA+ +
Sbjct: 311 QLGALIDLWQDCLDLYQQFHEGHPEAAPALRYHVQQLVGGPRHYDYGLLAFTAASVALSV 370

Query: 344 ATSIFFWIESGWADGMTFTQISGVLCCLLATMDDPVPAMRKFVGVTMCSVMAAFVYNFTI 403
                 W  SGW  G +   I+ V  C  A+ D+P P ++ F+  T+ S  AA VY F +
Sbjct: 371 FCLSMLWFVSGWEHGYSGVFIAAVAGCFFASQDNPAPFIKSFLVATLISSTAAGVYLFAL 430

Query: 404 FPVIDGFVPLIAALGLFLVPAGICLAVPSLAIVGMGLCINFPLLLTLQAYPRADFVTFSN 463
            P +  F  L   L + L+  G     P  A   + + +     +TLQ   RADF  F++
Sbjct: 431 MPNVHDFGSLAILLAVPLLLLGTLAGRPQHAGTVIVIAVQTISNITLQDSYRADFQLFAD 490

Query: 464 AAVATILAMVWTITVCGIFRSVRAETNARRFFSVTRKHVANIAAGKYSNAHVTYDRMTDI 523
            A++T L +++      + R       ARR        +A +A  +       +    D 
Sbjct: 491 IALSTALGVLFAFVWARLTRPFGTLWAARRLVRHGWLSLAALADLR------RWRNEADD 544

Query: 524 AGLFASRAAK-VPTTSDIWD-----GDLLRDLRAGLHLTAMLERIETVSGGLQVLAKPIF 577
           A  F  R A+ +P  + + D      D  R+LR G  L  + E     +  ++   +P+ 
Sbjct: 545 ASSFIDRIAQLLPRLAQLDDDRLALNDATRELRVGFRLLELREL--RPAPAIEQKLEPVL 602

Query: 578 PTIRTLYQQPRAGRGERLKNAVRALDDLILSAEARTAVDIELLSHAVA-----LRVCIAP 632
             IR  +      R +    A   L D + +A      D    +H  A     LR+ +  
Sbjct: 603 GMIRAHFLACATARSQ--LPAPEPLRDALEAALLDLQCDASPSAHRAAQVVHGLRLALFA 660

Query: 633 DADAPTLKTP 642
           DA A     P
Sbjct: 661 DASASVRAAP 670