Pairwise Alignments

Query, 379 a.a., ABC transporter membrane spanning protein from Agrobacterium fabrum C58

Subject, 333 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  104 bits (260), Expect = 3e-27
 Identities = 82/324 (25%), Positives = 136/324 (41%), Gaps = 45/324 (13%)

Query: 34  ISKYLVYGMLGVAIALTWGYAGILNLGQGLFFGLGAYMLAMSLKLSSLTSLQQGSDKPVP 93
           +++     +L +++ L  GY G+  LG    FG GAY        + + ++  G   P+ 
Sbjct: 46  LTRITAIALLVLSLDLVTGYCGVATLGHAALFGSGAYA-------AGIAAVHFGITDPL- 97

Query: 94  DFMLWNAEPGAPTELCCINKGSFLWLPFQSQSVGLVLGVLLPVLIAGALGMLVFRKRISG 153
                                           + L  G+L   L   A G+++ R    G
Sbjct: 98  --------------------------------LMLAAGILGGALAGLACGVVILRAH--G 123

Query: 154 VFVSIITLALVLLVRLVVVDAQPVTNGFNGLTDLGW-LMVGGIEFDPYSRATYYLCAACL 212
           +   ++++AL+ L       A   T G +GL  +    ++G   FD + R  Y      L
Sbjct: 124 LPQLVLSIALIHLFHEFANKASSWTGGSDGLAGISPDPLIGLFAFDLWGRTAYVFGVVLL 183

Query: 213 SLTLIGARLVVETRAGMILQAIRDDQVRARYLGFDVSLYQVFFFVISAGIAGVAGMLYVV 272
           ++  +  RLVV +  GM+ + IR+D  R R +G   ++  +  +VIS  +AGV G L  V
Sbjct: 184 AIVFVLLRLVVRSPFGMLCRGIREDPTRIRAMGASPTIALLKMYVISGAVAGVGGALNAV 243

Query: 273 VAEFASPTFMDLSFSVTMVVWAAVGGRSSLLGACIGAILINMIEAEVSETEALVEAWKAI 332
             +      +  + S   +V   +GG  SL GA  G I+    E  VS        W  +
Sbjct: 244 STQVVGLDSLSFTLSAESLVMLVLGGTGSLFGALTGTIVFMFFEDLVSTANPF--HWLTM 301

Query: 333 IGLIFVLVVLFMPRGLGGVAHDVL 356
           +G + + VVLF P+GL G   +VL
Sbjct: 302 VGALLIAVVLFAPKGLYGTVAEVL 325