Pairwise Alignments

Query, 416 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 372 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Pseudomonas stutzeri RCH2

 Score =  101 bits (252), Expect = 3e-26
 Identities = 87/364 (23%), Positives = 151/364 (41%), Gaps = 16/364 (4%)

Query: 18  ALALPALGGRAFAADAIKVGALYSQTGGLSVAEKLLANGVMMAVAEINAAGGVLGRQVEV 77
           A+AL        AAD I++G     TG ++    +   G  MA+ +IN AGGV G Q++ 
Sbjct: 13  AMALTGAASYTLAADTIRIGLAGPVTGPVAQYGDMQFIGAEMAIEQINKAGGVNGAQLKG 72

Query: 78  VVEDGASDPKTFSEKASKLILKDKISTVFGCHTSASRKAVLPIFERRGAMLFYQTH---- 133
           V  D A DPK     A+K I+ D +  V G   S+S +    I+E  G ++         
Sbjct: 73  VRYDDACDPKQAVAVANK-IVNDNVKFVVGHLCSSSTQPASDIYEDEGILMITAASTSPD 131

Query: 134 --YEGFECSRNVVYSGAVPNQQLSNYIPWIVEKLGKKKFFIVGSNYVYPREMAKVSKKLI 191
               G+E     +   ++      N+   I + +  K   ++     Y   +A   K+ +
Sbjct: 132 ITSRGYELIFRTIGLDSLQGPTAGNF---IADHVKPKNVAVIHDKQQYGEGIATAVKQTL 188

Query: 192 EAAGAEWVADEYLELGHSEWAVMVSKIKESGADVVLSNVVGDSIIAFYREFKNQGLSQED 251
           E    +    E +  G  +++ +++K+K  G D V        +    R+ K +GL+   
Sbjct: 189 EGKNIKVGLFEGINAGDKDFSSLIAKLKREGVDFVYYGGYHPELGLLLRQSKEKGLNVRF 248

Query: 252 IPICATVTSEIEIAAMGAEYAAGSYTSFPYFMSIETPENKSFIERFRTFVNDPKAVTYHS 311
           +       S  EI+A+    + G Y + P     + P NK  ++ F+    DP       
Sbjct: 249 MGPEGVGNS--EISAIAGPASEGMYVTLPKSFD-QDPRNKELVDGFKAKKQDPSG---PF 302

Query: 312 LEAAYFQVFLWKQAVEKSGDLSADAIRAGIRGQTYDAPGGKVTTDPDNLHCWLTPRIGQW 371
           +  AY  V +  + +EK+G    D +   +R  T+D P G ++ D           + +W
Sbjct: 303 VFPAYAAVQVIAEGIEKAGSTDTDKVAEALRSNTFDTPTGMLSFDEKGDLKDFNFVVYEW 362

Query: 372 QPDG 375
             DG
Sbjct: 363 HQDG 366