Pairwise Alignments
Query, 642 a.a., two component sensor kinase from Agrobacterium fabrum C58
Subject, 853 a.a., Sensor histidine kinase from Sinorhizobium meliloti 1021
Score = 311 bits (798), Expect = 6e-89
Identities = 201/547 (36%), Positives = 291/547 (53%), Gaps = 19/547 (3%)
Query: 105 NDIYAPTIGNKHPHAFGRPAREYWNELWDDLEPLLKRVLDKGETIAAKDRPFYIERHGYP 164
ND + +G +Y +E D E GET R ++ G
Sbjct: 313 NDAFCTMLGRSREQLLNMTFLDYTHEDDRDEEARCYARQVSGETDTYAIRKRAVKADG-- 370
Query: 165 ETVYFDISYSPVTDQDGIVRGVFCIVNETTERVKADAALRESEERLRAIFAQSAVGIALG 224
+Y D+ S V D+ G R ++ + TE + D RESE+ +R + +
Sbjct: 371 TVIYLDVYSSTVRDRTGRFRYGVRVLLDVTEAKRMDDRRRESEQHMRDLLEALPAAVYTT 430
Query: 225 DLTGKLISVNDHFCQIVGRRRDELIGIQMQDITFAEDLPENQRLFKHMVETGESFEIEKR 284
D G++ N ++ GR IG + +T+ P+ L + + E R
Sbjct: 431 DAEGRITFFNKAAVEMAGRTPQ--IGDKWC-VTWRLYRPDGTYLPHDQCPMAVTLK-EDR 486
Query: 285 YVRG--------DGSLVWVLNSVSAIRDDQGNMSQAVAISADIGERRHAQEVERHLASMI 336
VRG DG+ V + + + D G + AV + DI +R A E LAS++
Sbjct: 487 PVRGEQAVAERPDGTRVPFIPYPTPLHDVAGKLVGAVNMLVDISDREKAAEYAERLASIV 546
Query: 337 ASSNDAILGIDLDMTITSWNAAAEKLYGYSEDEVVGRTVLMLVPDDRQEEEPTILRQIKA 396
S+DAI+ D I +WN AE+L+GYS +EV+G+ + +L+P DRQ EEP IL +I+
Sbjct: 547 RFSDDAIVSKDTQGIIQTWNKGAERLFGYSAEEVIGKPINILIPPDRQGEEPGILERIRR 606
Query: 397 GRIVEPYETQRLRKDGRLVEVLLSVSPIRDVNGRVIGASKTAHDITARKDADRLRSILVN 456
++ YET R+RKDG L++V L+VSP++D GRV+GASK A DIT R+ ++ R +LVN
Sbjct: 607 DEHIDHYETVRIRKDGSLIDVSLTVSPLKDARGRVVGASKIARDITERRRSEEHRKLLVN 666
Query: 457 ELHHRVKNILATVTAIARQTIGRDKANHEDMEAFTSRLGSLSRAQDLLVHADWQHADLRA 516
EL+HRVKN LATV ++A QT A+ ED F SRL +L+RA D+L WQ ADL
Sbjct: 667 ELNHRVKNTLATVQSLAAQTFRGVNAS-EDFGRFQSRLVALARAHDVLTRESWQGADLGE 725
Query: 517 VLQQALSPY---PAESFQISGPGVSLPPRAVVSLSLALHELATNAAKYGALSVPEGQVSI 573
VL ++P P + Q SGP + L P+ ++LS+A HEL TNAAKYGAL+ G + +
Sbjct: 726 VLHATINPICVEPQQRVQASGPPLRLRPKMALALSMAFHELCTNAAKYGALTNDGGLIKV 785
Query: 574 SWQRQGTDG-ERLRVVWEERGGPEVMSPQRKGFGSTLVERLLSAELNGETKLFYEKNGVI 632
+W + L + WEE GGP VM P R GFG+ L+ER L+ EL G+ L + +GV
Sbjct: 786 NWHVSNIESVSHLHLQWEEIGGPSVMVPARTGFGTRLLERALARELGGKVDLVFAPSGVR 845
Query: 633 CVIEAEI 639
IEA +
Sbjct: 846 FHIEAPL 852
Score = 113 bits (283), Expect = 3e-29
Identities = 82/291 (28%), Positives = 142/291 (48%), Gaps = 17/291 (5%)
Query: 179 QDGIVRGVFCIVNETTERVKADAALRESEERLRAIFAQSAVGIALGDLTGKLISVNDHFC 238
+DG C + T + + A RE+EERL A + + +GIA D G+L+ VND FC
Sbjct: 258 EDGKFVNTRCFTTDITSLHETENAWRETEERLAATYQAATIGIAESDADGRLLRVNDAFC 317
Query: 239 QIVGRRRDELIGIQMQDITFAEDLPENQRLFKHMVE-TGESFEIEKRYVRGDGSLVWVLN 297
++GR R++L+ + D T +D E R + V +++ I KR V+ DG+++++
Sbjct: 318 TMLGRSREQLLNMTFLDYTHEDDRDEEARCYARQVSGETDTYAIRKRAVKADGTVIYLDV 377
Query: 298 SVSAIRDDQGNMSQAVAISADIGERR----HAQEVERHLASMIASSNDAILGIDLDMTIT 353
S +RD G V + D+ E + +E E+H+ ++ + A+ D + IT
Sbjct: 378 YSSTVRDRTGRFRYGVRVLLDVTEAKRMDDRRRESEQHMRDLLEALPAAVYTTDAEGRIT 437
Query: 354 SWNAAAEKLYGYSEDEVVGR----TVLMLVPDDR--QEEEPTILRQIKAGRIVEPYETQR 407
+N AA ++ G + +G T + PD ++ + +K R V +
Sbjct: 438 FFNKAAVEMAGRTPQ--IGDKWCVTWRLYRPDGTYLPHDQCPMAVTLKEDRPVRGEQAVA 495
Query: 408 LRKDGRLVEVLLSVSPIRDVNGRVIGASKTAHDITARKD----ADRLRSIL 454
R DG V + +P+ DV G+++GA DI+ R+ A+RL SI+
Sbjct: 496 ERPDGTRVPFIPYPTPLHDVAGKLVGAVNMLVDISDREKAAEYAERLASIV 546
Score = 67.8 bits (164), Expect = 2e-15
Identities = 68/312 (21%), Positives = 126/312 (40%), Gaps = 14/312 (4%)
Query: 171 ISYSPVTDQDGIVRGVFCIVNETTERVKADAALRESEERLRAIFAQSAVGIALGDLTGKL 230
++ P+ D G+++G + +++ + +A + + L F SA+G+ + G +
Sbjct: 127 VNIRPLRDHRGVIQGAINCFQDISQQKRIEAEVNCKSKDLEDFFENSAIGLHIVSAAGII 186
Query: 231 ISVNDHFCQIVGRRRDELIGIQMQDITFAEDLPENQRLFKHMVETGESFEIEKRYVRG-D 289
+ N +++G DE +G + + F D P + + GE + +R D
Sbjct: 187 LRANKAELELLGYPADEYVGRHIAE--FHADAPVIGDILDRL-SCGEKLDRYPARLRARD 243
Query: 290 GSLVWVLNSVSAIRDDQGNMSQAVAISADIGERRHAQ----EVERHLASMIASSNDAILG 345
GS+ VL S R + G + DI + E E LA+ ++ I
Sbjct: 244 GSIKHVL-ITSNSRFEDGKFVNTRCFTTDITSLHETENAWRETEERLAATYQAATIGIAE 302
Query: 346 IDLDMTITSWNAAAEKLYGYSEDEVVGRTVLMLV-PDDRQEEEPTILRQIKAGRIVEPYE 404
D D + N A + G S ++++ T L DDR EE RQ+
Sbjct: 303 SDADGRLLRVNDAFCTMLGRSREQLLNMTFLDYTHEDDRDEEARCYARQVSGETDTYAIR 362
Query: 405 TQRLRKDGRLVEVLLSVSPIRDVNGRVIGASKTAHDITARKDADRLRSILVNELHHRVKN 464
+ ++ DG ++ + + S +RD GR + D+T K D R E +++
Sbjct: 363 KRAVKADGTVIYLDVYSSTVRDRTGRFRYGVRVLLDVTEAKRMDDRR----RESEQHMRD 418
Query: 465 ILATVTAIARQT 476
+L + A T
Sbjct: 419 LLEALPAAVYTT 430
Score = 50.1 bits (118), Expect = 4e-10
Identities = 72/308 (23%), Positives = 129/308 (41%), Gaps = 31/308 (10%)
Query: 225 DLTGKLISVNDHFCQIVGRR------RDELIGIQMQDITFAEDLPENQRLFKHMVETGES 278
D G L+ N ++ GR+ R+ G Q ++ + + ++TG S
Sbjct: 48 DHEGWLVGYNAEAAELWGRQPSLSAPRERFCGSQRLFLSDGSPMDHQECPMAEAIKTGVS 107
Query: 279 FEIEKRYV-RGDGSLVWVLNSVSAIRDDQGNMSQAVAISADIGERRHAQ-EV---ERHLA 333
+ + R DGS ++ L ++ +RD +G + A+ DI +++ + EV + L
Sbjct: 108 TRNAEVIIERPDGSRIFALVNIRPLRDHRGVIQGAINCFQDISQQKRIEAEVNCKSKDLE 167
Query: 334 SMIASSNDAILGIDLDMTITSWNAAAEKLYGYSEDEVVGRTVLMLVPDDRQEEEPTILRQ 393
+S + + I N A +L GY DE VGR + D + IL +
Sbjct: 168 DFFENSAIGLHIVSAAGIILRANKAELELLGYPADEYVGRHIAEFHADAPVIGD--ILDR 225
Query: 394 IKAGRIVEPYETQRLRKDGRLVEVLLSVSPIRDVNGRVIGASKTAHDITARKDADRLRSI 453
+ G ++ Y + +DG + VL++ S R +G+ + DIT+ + +
Sbjct: 226 LSCGEKLDRYPARLRARDGSIKHVLIT-SNSRFEDGKFVNTRCFTTDITSLHETE----- 279
Query: 454 LVNELHHRVKNILATVTAIARQTIGRDKANHEDM-----EAFTSRLGSLSRAQDL-LVHA 507
N + + AT A TIG +++ + +AF + LG SR Q L +
Sbjct: 280 --NAWRETEERLAATYQA---ATIGIAESDADGRLLRVNDAFCTMLGR-SREQLLNMTFL 333
Query: 508 DWQHADLR 515
D+ H D R
Sbjct: 334 DYTHEDDR 341
Score = 32.0 bits (71), Expect = 1e-04
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 7/111 (6%)
Query: 342 AILGIDLDMTITSWNAAAEKLYGYS------EDEVVGRTVLMLVPDDRQE-EEPTILRQI 394
A+ D + + +NA A +L+G + G L L + +E + I
Sbjct: 43 AVYVCDHEGWLVGYNAEAAELWGRQPSLSAPRERFCGSQRLFLSDGSPMDHQECPMAEAI 102
Query: 395 KAGRIVEPYETQRLRKDGRLVEVLLSVSPIRDVNGRVIGASKTAHDITARK 445
K G E R DG + L+++ P+RD G + GA DI+ +K
Sbjct: 103 KTGVSTRNAEVIIERPDGSRIFALVNIRPLRDHRGVIQGAINCFQDISQQK 153