Pairwise Alignments

Query, 298 a.a., ABC transporter membrane spanning protein (branched chain amino acid) from Agrobacterium fabrum C58

Subject, 291 a.a., putative high-affinity branched-chain amino acid transport system permease protein LivH from Phaeobacter inhibens DSM 17395

 Score =  160 bits (404), Expect = 4e-44
 Identities = 91/292 (31%), Positives = 156/292 (53%), Gaps = 7/292 (2%)

Query: 10  IEVLIGGLLSGVMYSLVAIGFVLIYKTSGVLNFSQGALLLFAALTFVSLVERG---VPFA 66
           +++L+ GL +G +Y L+A+GFVLIYK +  +NF+QG  ++  A   + L       +PF 
Sbjct: 4   VQLLVSGLANGCVYGLIALGFVLIYKATEAVNFAQGDFMMLGAFVTLGLTNAEYLHLPFW 63

Query: 67  PAFAITFAIMVVIGIAIERVVLRPLTNKPPITLFMATLGLSYIIEGAAQLLWGTQVHGLD 126
            A  ++ AIM  +G  ++ V+LR L  +    + + T+ L ++I   A  +WG +   L+
Sbjct: 64  LAAPLSIAIMAGLGYLLDLVILRHLFGQNQTAVVILTIALGFVIRFFAGAIWGHEPQTLE 123

Query: 127 LGIEDIPFDVGGVFISQFDIFAALVAAGMVAALSAFFRYTRIGLGFRAVADDQFAALAVG 186
             +      + GV +   D+   +V   +  +L  FF+ T++GL  +A + +Q AA  +G
Sbjct: 124 SPLALGDVQLAGVVLGLADLAIIIVTVLLTWSLYQFFQRTKLGLAMQAASQNQMAAYFMG 183

Query: 187 LRLPWIWASVWAAAGLVALVAGLLWGARVGVQFSLSLVVLKALPVLVLGGFDSILGAIIG 246
           + +  +   +W  +G  A VAG+L+ ++  +  +  L+ +KA    V+GGF S+ GA+ G
Sbjct: 184 IPVKRVQGLIWGLSGATAAVAGILFASKGAIDPNAGLLGIKAFAAAVIGGFGSLPGALAG 243

Query: 247 GLLVGASEKLAEVYIGEYFGGGIEGWFAYVVALAFLLIRPSGLFGQKFVERV 298
           GL+VG  E  A      Y   G      YV+ LA L+ RP GLF Q   ++V
Sbjct: 244 GLIVGVIEPFA----ARYLAAGYSQIAPYVLLLAVLVFRPHGLFSQVRTKKV 291