Pairwise Alignments

Query, 298 a.a., ABC transporter membrane spanning protein (branched chain amino acid) from Agrobacterium fabrum C58

Subject, 308 a.a., branched-chain amino acid ABC transporter permease LivH from Klebsiella michiganensis M5al

 Score =  120 bits (301), Expect = 4e-32
 Identities = 84/309 (27%), Positives = 153/309 (49%), Gaps = 21/309 (6%)

Query: 6   WLFFIEVLIGGLLSGVMYSLVAIGFVLIYKTSGVLNFSQG---------ALLLFAALTFV 56
           +L+F++ +  G+  G  Y+L+AIG+ ++Y   G++NF+ G         + ++ AAL  +
Sbjct: 5   FLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMM 64

Query: 57  SLVERGVPFAPAFAITFAIMVVIGIAIERVVLRPLTNKPPITLFMATLGLSYIIEGAAQL 116
            +    +  A  F     I    G +IERV  RP+ +   +   ++ +G+S  ++    L
Sbjct: 65  GIDTSWLLVAAGFVGAIVIASAYGWSIERVAYRPVRSSKRLIALISAIGMSIFLQNYVSL 124

Query: 117 LWGTQVHGLDLGIEDIPFDVG-----GVFISQFDIFAALVAAGMVAALSAFFRYTRIGLG 171
             G++   L   + +  + VG        I+   +   +V    + AL+ F RY+R+G  
Sbjct: 125 TEGSRDVALP-SLFNGQWTVGSSDNFSATITTMQLVIWVVTFIAMLALTLFIRYSRMGRA 183

Query: 172 FRAVADDQFAALAVGLRLPWIWASVWAAAGLVALVAGLLWGARVGV--QFSLSLVVLKAL 229
            RA A+D   A  +G+    + A  +     +A VAG+L G   GV   +   +  +KA 
Sbjct: 184 CRACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGMKAF 243

Query: 230 PVLVLGGFDSILGAIIGGLLVGASEKLAEVYIGEYFGGGIEGWFAYVVALAFLLIRPSGL 289
              VLGG  SI GA+IGGL++G +E L+  Y+   +   +    ++ + +  LL+ P+G+
Sbjct: 244 TAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVV----SFALLILVLLVMPTGI 299

Query: 290 FGQKFVERV 298
            G+  VE+V
Sbjct: 300 LGRPEVEKV 308