Pairwise Alignments

Query, 364 a.a., ABC transporter membrane spanning protein (branched chain amino acid) from Agrobacterium fabrum C58

Subject, 355 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  409 bits (1052), Expect = e-119
 Identities = 205/322 (63%), Positives = 254/322 (78%)

Query: 17  RAGTVVVLAIAYLVVPFVGTSYLFEAILLPFLALSLAGVGLNLLTGYAGQVSLGSAAFMA 76
           R G   +L  A++VVP++G  Y F AIL+PFL LSLAG+GLNLLTGYAGQ+SLGSAAFMA
Sbjct: 26  RHGLAALLLFAFVVVPWLGNDYWFSAILIPFLVLSLAGLGLNLLTGYAGQLSLGSAAFMA 85

Query: 77  VGAFAAYNFDLRVDGLPLTVSIVLAGLSAAIIGIVFGLPSLRLRGFYLAVSTLAAQFFVQ 136
           VGAFA YN ++RV GLPL VSI L GL+AA++ ++FGLPSLR++GFYL VSTLAAQFFV 
Sbjct: 86  VGAFATYNLEVRVAGLPLVVSIALGGLTAALVAVLFGLPSLRIKGFYLLVSTLAAQFFVT 145

Query: 137 WALTKFSWLSNESASGVIDAPALSLAGISFEGPVGRYLFALTTVTALTFLAYRLVSSQTG 196
           WALT+FSW SN SASGVI AP L + GI+ + P GRYL  L+ V AL +L   LV S+ G
Sbjct: 146 WALTRFSWFSNNSASGVISAPRLDVFGINLDAPAGRYLLTLSVVVALFWLGKNLVRSELG 205

Query: 197 RNFIAVRDNETAARIIGVPVLRTKLLAFAISSFIIGVAGVIWAFAYLRTVEPAGFNLDRS 256
           RN++AVRD +TAA +IG+ + +TKLLAFAIS F +GVAG +WAFAYL TVEP GF+L+RS
Sbjct: 206 RNWMAVRDMDTAAAVIGIALAKTKLLAFAISGFFLGVAGALWAFAYLGTVEPHGFDLNRS 265

Query: 257 FQILFIVIIGGLASIRGAFFGAALIVVFPLVLSRLGSLLLGDVFDSGVLDMTQRIVIGAL 316
           FQILFI+IIGGL S+ G F GAA IV+FP++LS L SLL G + D+G ++  Q+++ GAL
Sbjct: 266 FQILFIIIIGGLGSLLGNFLGAAFIVLFPVLLSNLVSLLPGGLVDAGQVENLQKMIFGAL 325

Query: 317 IILFLILEPDGLVSLWDRLKSR 338
           IILFLI EP+GL  LW R + R
Sbjct: 326 IILFLIKEPEGLARLWQRFRQR 347