Pairwise Alignments

Query, 681 a.a., two component sensor kinase/response regulator hybrid from Agrobacterium fabrum C58

Subject, 845 a.a., Histidine kinase/response regulator hybrid protein from Pseudomonas fluorescens FW300-N2E2

 Score =  321 bits (823), Expect = 8e-92
 Identities = 208/578 (35%), Positives = 316/578 (54%), Gaps = 31/578 (5%)

Query: 113 FVERPFHPTTFISVARSAMRARRRQYEASARMEALDEGERRLQTALEAGRLGAWELNLST 172
           + +R   P  F+  A      +R +       +AL + +  LQ  + A  +    ++   
Sbjct: 272 YKDRHGRPKRFLGAALDLTERKRTE-------QALRQSQTELQLIINAMPILISYVDREE 324

Query: 173 NVLTTSATCRGIFGRSPND--GFTYEDLL-QAIHPDDAARMKDALRNTIETGADYSITYR 229
                ++     +G +P +  G T  ++L +  +   A ++ DAL      G   S T +
Sbjct: 325 RFRLNNSAYLDWYGLTPQELYGKTIREVLGEEAYAARAQQIADAL-----AGKPCSFTVQ 379

Query: 230 IVWPDGSIHGAEIRAQLHRDRTGRPIRLVGVSADITERMQSEEQQRHLNETLEERVAERT 289
           +   DG    + I         G          D TE  ++EE  R+LNETLEERV  RT
Sbjct: 380 MDHRDGRPRHSLINYLPRHGADGAVNGFYIFVIDETESRKTEEALRNLNETLEERVIART 439

Query: 290 RELEEAHRLVLAEVSQRERAEEQLRHAQKMEAIGQLTGGVAHDFNNLLMAVLGNLELLRK 349
           ++L EA+  + +E+ +RERAEE LRHAQKMEA+GQLTGG+AHDFNN+L  +LG+L+L+++
Sbjct: 440 QQLAEANHRLQSEMFERERAEEALRHAQKMEAVGQLTGGIAHDFNNMLTGILGSLDLMQR 499

Query: 350 HLTDD--AKATRLIDGALQGAQRGASLTQRLLAFARRQDLQVGPVDLAGLVTNMQDLLQR 407
           ++     A+  R  + A+  A R A+LT RLLAF+RRQ L   P+D   LV +++DLL R
Sbjct: 500 YIAAGRAAEIGRFTEAAVSSANRAAALTHRLLAFSRRQSLDRKPLDANDLVHSLEDLLSR 559

Query: 408 SVGSRIAIEVVAPERLPAVSADANQVELALLNLAVNARDAMPDGGTIKIGLKEA-VQPTV 466
           + G  I + +     L  V+ DA+Q+E ALLNL +NARDAMP+GG + I      +  T 
Sbjct: 560 TTGDHIVLRLQLASELWPVNTDASQLENALLNLVINARDAMPEGGELVIETANVYLDGTD 619

Query: 467 SDLLAP---GRYVVLSVIDQGQGMDAATLQKAIEPFFSTKELGKGTGLGLSMVHGLALQL 523
            + L P   G YV+++V D G GM  A L KA +PFF+TK +G+GTGLGLSM++G A Q 
Sbjct: 620 INTLEPVKAGDYVMIAVSDNGSGMTPAVLAKAFDPFFTTKPIGQGTGLGLSMIYGFAQQS 679

Query: 524 NGQLKLASAVGEGTTADLWIP---VSTSQSLEKEQDVAVADARNDAGPKRILLVDDDALI 580
            G L L S  G+GT   L++P    S++Q  E  + V V  A      + +LLV+D+  +
Sbjct: 680 GGHLNLDSVPGQGTRVQLYLPRLHASSAQPPETPETVVVPPA---IAGETVLLVEDEPAV 736

Query: 581 AMSSADMLTDLGHEVVEAHSGKEALSLIDGGATFDLVITDYSMPGMTGAELAKAVRDRLP 640
            M   D+L  LG+  +EA     AL +++     DL++TD  +PGM G +LA+  R   P
Sbjct: 737 RMLVLDLLQALGYTALEARDAMTALPMLESDQRIDLLVTDVGLPGMNGRQLAEIARQHRP 796

Query: 641 SLPIVLASGY----VDFPSGVELEVARLSKPYSQDELA 674
            L ++  +GY     +    +E  +  ++KP++ D LA
Sbjct: 797 GLKVLFMTGYAQKAAERQGFLEQGMDMVAKPFTLDLLA 834



 Score = 81.6 bits (200), Expect = 1e-19
 Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 6/158 (3%)

Query: 128 RSAMRARRRQYEASARMEALDEGERRLQTALEAG-RLGAWELNLSTNVLTTSATCRGIFG 186
           R AM   RR   + A ++A  E E RLQ AL A   LG W+ ++S +     A    + G
Sbjct: 153 RLAMEFERR---SEASLKAQHESEERLQLALAAADALGTWDWDISEDRFIADAHFALLHG 209

Query: 187 RSPNDG--FTYEDLLQAIHPDDAARMKDALRNTIETGADYSITYRIVWPDGSIHGAEIRA 244
             P+          L+ +HP+D A +  ++++ I  G +Y+  YR++ PD  +    +R 
Sbjct: 210 VDPSLSRQLPISAYLEGVHPEDRAMVARSIKHCITHGTEYAEEYRLLQPDDELRWVYVRG 269

Query: 245 QLHRDRTGRPIRLVGVSADITERMQSEEQQRHLNETLE 282
           + ++DR GRP R +G + D+TER ++E+  R     L+
Sbjct: 270 RCYKDRHGRPKRFLGAALDLTERKRTEQALRQSQTELQ 307