Pairwise Alignments

Query, 242 a.a., ABC transporter membrane spanning protein from Agrobacterium fabrum C58

Subject, 219 a.a., amino acid ABC transporter permease from Methanococcus maripaludis S2

 Score =  140 bits (353), Expect = 2e-38
 Identities = 80/216 (37%), Positives = 123/216 (56%), Gaps = 3/216 (1%)

Query: 1   MSLDLVFDYVFSPAFFHGALLTLVITVTSLFFGMIAGLIVALLQESRI-RPLQIFTLVYL 59
           M   +VFD +  P       +TL IT+ S    +I  ++V   +     + L +  + Y+
Sbjct: 1   MKFYIVFDNI--PFIIDAVFVTLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYV 58

Query: 60  WLFRGTPVLFQIIFIYNVLPTFGVMLSAFVSAVIALSLNEGAYMAEIIRSGLQAVKKGQR 119
            +FRGTP+L Q+ FIY  LP+ G+ +S+  +AV+ LSLN GAY++EIIR+ +Q+V  GQ 
Sbjct: 59  EVFRGTPLLIQLFFIYYGLPSIGITMSSTFAAVLGLSLNGGAYISEIIRAAIQSVPVGQF 118

Query: 120 TAGLALGMTRFAVMCYIVIPQAARIVLPPTGNQMIGMLKTSALVSVVAVEELLLVANQTA 179
            A  +LGM +   M YIV+PQA RI +PP  N    +LK S+L+SV+A+ EL  +     
Sbjct: 119 EAAESLGMGKIESMVYIVLPQAFRITIPPLVNSFSSILKESSLISVLAITELTRIGQLIY 178

Query: 180 SSNFKYFEALTAAGIYYLALTSIFMGFQYLLERALD 215
           +   + FE     G+ YL L SI     + +E+ L+
Sbjct: 179 TRTSRPFEIYLTIGLIYLILVSIISIGSWKIEKKLN 214