Pairwise Alignments

Query, 276 a.a., ABC transporter membrane spanning protein from Agrobacterium fabrum C58

Subject, 319 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  142 bits (359), Expect = 7e-39
 Identities = 89/311 (28%), Positives = 155/311 (49%), Gaps = 48/311 (15%)

Query: 6   LQSLALYATVIFTLVMVLFPVYWLLVTALSTTDELYRLPPT--FWPD-DPQWDIFARV-- 60
           L  +A+ A ++ TL+  L P+YW+  TA    +    +PPT  F P+  P   +F +   
Sbjct: 12  LNRVAIAAVLVITLLF-LAPIYWITSTAFKPRNLATTIPPTVIFEPEISPFVKLFTKRSQ 70

Query: 61  ---------WAAKPILLW----------------------------LWNSMLAAIGSVAL 83
                    +AA P   W                              NS++ AI S  L
Sbjct: 71  LRSAPEPEDYAAAP---WWERLVFDGGEKVVRSGRGQVQLSGYPNRFMNSLIVAITSTVL 127

Query: 84  SMLVSVSAGYALSRYSMRGGATMGLFVLTAKMLPATLLVIPLFSIFSSFGLIGSLWTLVL 143
           ++ +     Y  SR+ ++G A +  F+L+ +MLP  ++ IP+F ++ + GL  + W L++
Sbjct: 128 AVAMGTFTAYGFSRFKVKGEADLLFFILSTRMLPPVVVAIPMFLMYRAVGLNDTHWGLII 187

Query: 144 AHSTMIIPFATWMLKGYFDTIPKELEQAAMVDGCSPIGAMVRVVLPIATPGLAATALYAF 203
            ++   + F+ W++KG+ D IPKE E+AA+VDG + + A  ++VLP A  G+AATA++ F
Sbjct: 188 LYTAFNLSFSVWLMKGFIDEIPKEYEEAALVDGYTRLEAFFKIVLPEAATGIAATAVFCF 247

Query: 204 VLSWADYAYARTFLVNSPDNWTANLGITTMQGEYVTYWNDISAASVFIALPIIAIYLFLE 263
           + +W +YA+A   ++ +    TA   I +  G  +  W  I+A +    LP+      L 
Sbjct: 248 ITAWNEYAFA--LIMTNRRAQTAPPFIPSQVGSGLPDWTVIAAGTFLFLLPVAIFTFLLR 305

Query: 264 RYLVGGLTAGA 274
            +L+ G++ GA
Sbjct: 306 NHLLRGMSFGA 316