Pairwise Alignments

Query, 307 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 298 a.a., endonuclease from Klebsiella michiganensis M5al

 Score = 97.8 bits (242), Expect = 3e-25
 Identities = 83/303 (27%), Positives = 134/303 (44%), Gaps = 16/303 (5%)

Query: 3   ITVTTAPCCWGVDDVRN-PNLPPWELVFDEVKAAGYGGMELGPYGYVPLDTDLVSSALTS 61
           I V  +P  W  D + +     P E    E   AGY G+ELG     P   D ++  L  
Sbjct: 7   IHVGVSPLSWTNDVLEDLGGYIPLETCLAEAAEAGYEGIELGRK--FPRTIDTLAPVLNQ 64

Query: 62  RGLYIVAGTIFNDLVASENRDSLLRQTDEICSLITRLPRPPKSAGQRFSAPYLTVMDWGH 121
             L + +G  +N L+A  + +  L    +   L+  L       G+  + P LT +D   
Sbjct: 65  AKLKLASGW-YNGLLAKRSFEDELAAVHDHAMLLKSLGAKVMVYGECGAMPGLTPLD--- 120

Query: 122 DERDYAAGHSDRAPRLDDAAWAGMMNNIRAISELARDKYGVRATIHPHAGGYIEFEDEIA 181
                    S     ++   +A  +NN+ A+S L    YG+R   H H    +E +DE+ 
Sbjct: 121 ----EPLSKSPPLGHIELPQYAEKVNNL-AVSLLKN--YGLRLAYHHHLMMVVETDDEL- 172

Query: 182 RLAADIPQEVAGFCLDTGHTWYAGMDPVETLRKYADRLDYIHFKDIDKAVFDRIMGEHIR 241
           +       ++ G  LD GH   AG+D    L  Y +R+ ++H KD+   V + ++  ++ 
Sbjct: 173 KAFLKATNDLVGIALDCGHATVAGVDINWVLENYGNRVAHVHLKDVRGEVLNNVINNNLS 232

Query: 242 FFEACGQGVMCPIGNGCIDYPAIRALLDELGYEGFITVEQERDPRNAGGSLADVKLSRDY 301
           F  A   G+    G G ++Y  +   L    YEG+I +E E+DP  A   L  VK +R +
Sbjct: 233 FNNAVRAGLFTVPGEGIVNYAPVIHFLKNSTYEGWIIIEAEQDPEKA-PPLETVKKARAW 291

Query: 302 LKS 304
           +KS
Sbjct: 292 VKS 294