Pairwise Alignments

Query, 336 a.a., LacI family transcription regulator from Agrobacterium fabrum C58

Subject, 294 a.a., ribose ABC transporter substrate-binding protein RbsB from Vibrio cholerae E7946 ATCC 55056

 Score = 49.7 bits (117), Expect = 9e-11
 Identities = 50/254 (19%), Positives = 110/254 (43%), Gaps = 8/254 (3%)

Query: 63  VAVLMQPPVNPFHAALREGIDLAGRMYTALNVQFFVHHIDPRKPAAIAAAVRDCRSYDGL 122
           VA+++    NPF   +++G +   +     N+       DP K  +    +   R    +
Sbjct: 29  VAIVLSTLNNPFFVTMKDGAEAKAKEL-GYNLIVLDSQNDPSKELSNVEDLT-VRGVKAI 86

Query: 123 VITSPDDIRIREAVAVLSR-KMPVVTLATDLTDCGRAAYVGPDDRQAGRVAGDLMGLFLR 181
           +I   D   +  A+ + +R K+PV+TL    +     +++  D+   G +AG  +   + 
Sbjct: 87  LINPTDSDAVSNAIRIANRSKIPVLTLDRGASRGEVVSHIASDNVVGGEMAGHFIEAKIG 146

Query: 182 EGGRVIVIAGSRDITGHREREEGFRAVLTERYPECSLAAVLETGENQEEAGRVVEIAFHD 241
              +VI + G    +  RER EGF   +  +  +  L A      ++ +   V+E     
Sbjct: 147 SDAKVIQLEGIAGTSAARERGEGFMNAV--KGSKMQLLASQPADFDRTKGLNVMENLLAA 204

Query: 242 DPALRGIY-HLSAGAVPIVSTLQRLGRIDDTVVITHELTPDRRMLLKSRKINAVIDQKPL 300
           +P ++ ++      A+  +  +Q  G+    +++  + T D    ++  ++ A + Q+P 
Sbjct: 205 NPDVQAVFAQNDEMALGALRAIQASGK--SVMIVGFDGTDDGIAAVERGQLAATVAQQPD 262

Query: 301 LEARLAVETISKLL 314
           +   + +ET  K+L
Sbjct: 263 MIGAIGIETADKML 276