Pairwise Alignments

Query, 445 a.a., DNA-damage-inducible protein F from Agrobacterium fabrum C58

Subject, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 64.3 bits (155), Expect = 8e-15
 Identities = 94/370 (25%), Positives = 155/370 (41%), Gaps = 46/370 (12%)

Query: 21  RDVLKIAIPMMIAYLSTPLVGLVATGVIAHMRNEALVGGVALASVIFDVIFVTFNFLRGA 80
           R ++ IA+P+ +  +     GLV   ++  +  EA +  V +A+      FVT   L G 
Sbjct: 17  RRLIAIALPITLQNIMFSSRGLVDVLMLGQL-GEAEIAAVGVAA---RATFVTTIMLVGV 72

Query: 81  TTG---FTAQAMGAGDRVG-EQRMLLSGLI---IALVAGLLLLLLKGPIGALGMSVMGAD 133
           TTG    TAQ  GAGDR G  +   L+ L+    A    LL L     I    MS+    
Sbjct: 73  TTGGALLTAQYWGAGDRKGVRESTALTWLVSNFFAFFTVLLFLFFPQQI----MSLTTDS 128

Query: 134 GIVAEVASTYFHWRIWSAPFVLFNFVAFGWLIGRGEAMWSMILQTLLNGLNAALSV--HW 191
             V  + S Y    +    F +F       +     AM    + T  +G+    +V  +W
Sbjct: 129 EQVNALGSQY----LIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNW 184

Query: 192 VIGLG------WGVEGVAIATLVAEAVTAVAGAALILGKTDRSAWRLPDI------PAIR 239
           ++  G       G++G AIAT+++ A+      + + GK    A+   DI      P I 
Sbjct: 185 ILIFGKFGFPAMGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDWPKIS 244

Query: 240 RSFEVNGDMMIRSFALLIGLSFFTRQSGFLGIEVLAANTILLRFYFFGVAFLDGVATAAE 299
           R   ++            GL  +    G  G++ LAA +++       ++ L G++TAA 
Sbjct: 245 RFLRLSLPTTFNFLIWAAGLFTYHAIMGQTGVQGLAALSVMTPVESISLSLLIGMSTAAA 304

Query: 300 QLAGRAVGA-HYRPAFDRTIKLT--TLWGGIFAA----LVSLAFLAGGDWVIALTAPTDI 352
            L G  +GA +Y   + + I +T  ++  GI  A    LV +  L       A TA T  
Sbjct: 305 VLVGNQLGAKNYEAVYYQAIGVTACSVLVGIVVAIGLYLVQIPVLG------AFTALTPE 358

Query: 353 VARLADSYLI 362
              L++ +++
Sbjct: 359 TRELSEKFML 368