Pairwise Alignments

Query, 445 a.a., DNA-damage-inducible protein F from Agrobacterium fabrum C58

Subject, 454 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  249 bits (636), Expect = 1e-70
 Identities = 154/420 (36%), Positives = 221/420 (52%), Gaps = 17/420 (4%)

Query: 20  HRDVLKIAIPMMIAYLSTPLVGLVATGVIAHMRNEALVGGVALASVIFDVIFVTFNFLRG 79
           HR VL IA+PM+++ ++ PL+GLV   VI H+ +   +GGVAL S +  V F    FLR 
Sbjct: 17  HRQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTMISVTFWLLGFLRM 76

Query: 80  ATTGFTAQAMGAGDRVGEQRMLLSGLIIALVAGLLLLLLKGPIGALGMSVMGADGIVAEV 139
           +TTG TAQA GA +     R+LL G +IAL    L LL   P+  L      A   V   
Sbjct: 77  STTGLTAQAHGAQNSQQLARVLLQGSVIALGLAALFLLFHRPVAELIFHFSDASSEVKTY 136

Query: 140 ASTYFHWRIWSAPFVLFNFVAFGWLIGRGEAMWSMILQTLLNGLNAALSVHWVIGLGWGV 199
           A  YF+ R WSAP  L NFV  GWL+G   A   M +  + N  N  L +  V+GLG  V
Sbjct: 137 AEAYFYIRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIVLDLLLVLGLGLKV 196

Query: 200 EGVAIATLVAEAVTAVAGAALILGKTDRSAWRLPDIPA-----------IRRSFEVNGDM 248
           EG AIA+++A+    + G  L +G+     WR   +PA           + R   +N D+
Sbjct: 197 EGAAIASVIADYAGLLFG-LLCVGR----YWRQHQLPAPFSFIPSLTKELSRLVALNRDI 251

Query: 249 MIRSFALLIGLSFFTRQSGFLGIEVLAANTILLRFYFFGVAFLDGVATAAEQLAGRAVGA 308
            +RS  L    SF T Q   LG +++AAN +L+ F       +DG A A E + G+A+GA
Sbjct: 252 FLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEAMVGKAIGA 311

Query: 309 HYRPAFDRTIKLTTLWGGIFAALVSLAFLAGGDWVIALTAPTDIVARLADSYLIYVVVLP 368
                    +  +T W  +   L+SL FL  G  +I +      V   A+ YL ++V +P
Sbjct: 312 KDDRQLRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATAEHYLPWLVAMP 371

Query: 369 VIGIIAFQMDGVYIGSTWSRQMRNLMVVSLIIYFAAWAVLQPLYGNDGLWISLLLFQGAR 428
           +I +  F +DGV+IG+T  ++MRN M VS + +FA +  +   YGN  LW+++L F   R
Sbjct: 372 LIAVWCFLLDGVFIGATKGKEMRNSMAVSAVAFFAIYGFMTH-YGNHALWLAMLSFMALR 430