Pairwise Alignments

Query, 263 a.a., ABC transporter membrane spanning protein (putrescine) from Agrobacterium fabrum C58

Subject, 256 a.a., spermidine/putrescine ABC transporter permease PotC from Vibrio cholerae E7946 ATCC 55056

 Score =  129 bits (323), Expect = 8e-35
 Identities = 68/245 (27%), Positives = 137/245 (55%), Gaps = 6/245 (2%)

Query: 18  AIFVIYLLLPLALMMAMSFKDANFIAFPISNWTLDWYGKVLQDKQFIEASVYSAGIALAT 77
           ++  ++L LP+ +++A SF +  F       +T  WY  ++ +   ++A+ +S  +A+ +
Sbjct: 11  SLVYLFLYLPIIVLIANSFNENKF-GIKWGGFTTKWYHALMNNDSLMQAAWHSINVAVFS 69

Query: 78  TIGATVIGVWIALLISTEGIRGKAILFALACLPAVVPGLINAISMRIFIRMVDIPTGTFA 137
              AT+IG   A+ +     +GK ++  +  +  + P ++ AIS+     ++    G F 
Sbjct: 70  ATAATLIGSLTAVALFRYQFKGKKVVSGMLFVVMMSPDIVMAISLLALFLVMGAKLGFFT 129

Query: 138 IILSHTVHAVPFVVIMVLTRLRSMPANLVDAARDLGADAFVAFMRVTVPYILPALIGGMI 197
           ++++H    +PFVV+ V TRL      +++AA+DLGA  +V   ++ +P   PA+  G +
Sbjct: 130 LLIAHITFCLPFVVVTVYTRLNGFDVKMLEAAKDLGAGEWVILKKIILPLAKPAVAAGWL 189

Query: 198 FCVLTSIDDFVRTFFLGGYKPT---LPMLIFAKVQGGMSPEINAMATIVLIVTAAIGLYA 254
                S+DD + + F+ G  PT   LP+ I++ V+ G+SPE+NA+AT++L+V+  + + +
Sbjct: 190 LSFTLSLDDVIISSFVTG--PTYEILPLKIYSMVKVGISPEVNALATVMLVVSLVLVVAS 247

Query: 255 EHFTR 259
           +   R
Sbjct: 248 QLLAR 252