Pairwise Alignments

Query, 346 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 59.7 bits (143), Expect = 1e-13
 Identities = 65/282 (23%), Positives = 122/282 (43%), Gaps = 20/282 (7%)

Query: 9   RRFGLLAAGAAVAAAVPFAARAAGSTAVAATFPGNWEDGYRT-VLTPLVKEAGFDLTVAP 67
           ++   L AG+A A ++     AA    +      NW     + +L    KE G  +  + 
Sbjct: 2   KKLATLLAGSACALSLLSGTAAAEDKELVFM---NWGPYINSGILEQFTKETGIKVIYST 58

Query: 68  AMAQDQLAKVMASPGNPPYDTLLMSPGQMAIAVENDLINKIDPSKLKNWGMLDPAF---- 123
             + + L   + +  N  YD ++ S   +A   +  ++ KID SKL N+  LD  +    
Sbjct: 59  YESNETLYAKLKTH-NQGYDLVVPSTYFVAKMRDEGMLQKIDKSKLSNFKNLDSNYLDKP 117

Query: 124 ---QGEYGPTVTIEVNGIAYNPDLVPAP--KGYRDLFENPAYKGLVSWTGFASNTGVMAY 178
                +Y     + + G+A N D+      + + DL++ P  KG +       +T  + +
Sbjct: 118 YDPNNDYSIPHVVAITGLAVNTDMYDPNDFQSWGDLWK-PELKGQLM---LMDDTREVFH 173

Query: 179 TEIAKI-YGSGPIDMDAVFKLFKEHPEHIKGV-VASTNHQMTLFQQGEIAVFMCSTGNVA 236
             + K+ Y     D   + + + E  + +  V V ++++    +  GE+ + M   G+ A
Sbjct: 174 IALRKLGYSGNSTDDKQIDEAYAELQKLMPNVLVFNSDNPAAPYLSGEVGLGMLWNGSAA 233

Query: 237 KLKAMGLKAEFVQPETGSPAAPVNIHLTKGAKNVDAAYAYMD 278
             +  GL  + V P+ G      N  ++ GAKNVDAA+  +D
Sbjct: 234 AAQKEGLPIKLVFPKEGGIGWVDNFAISSGAKNVDAAHKMID 275