Pairwise Alignments

Query, 284 a.a., ABC transporter membrane spanning protein (amino acid) from Agrobacterium fabrum C58

Subject, 219 a.a., amino acid ABC transporter permease from Methanococcus maripaludis S2

 Score =  120 bits (301), Expect = 3e-32
 Identities = 76/215 (35%), Positives = 120/215 (55%), Gaps = 13/215 (6%)

Query: 60  PVILGGVILTLELTAGAMVAGIIIGCLV-AVMATSQNIVLKAIAVAFVWWFRGVPLIVQI 118
           P I+  V +TL++T  + +  +II  LV +  A + +  L  + +A+V  FRG PL++Q+
Sbjct: 11  PFIIDAVFVTLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEVFRGTPLLIQL 70

Query: 119 FFWFNIALFVPEIGFGSWSVSVNDIVTPAFAGFLALGLHEAANMSEIIRSGLTAVDRGQR 178
           FF   I   +P IG           ++  FA  L L L+  A +SEIIR+ + +V  GQ 
Sbjct: 71  FF---IYYGLPSIGI---------TMSSTFAAVLGLSLNGGAYISEIIRAAIQSVPVGQF 118

Query: 179 EAASSLGLRPLQTLRTVVLPQAIRLIVPPTGNQAIGMLKASAIVSVIGMQDLLTQAQAIY 238
           EAA SLG+  ++++  +VLPQA R+ +PP  N    +LK S+++SV+ + +L    Q IY
Sbjct: 119 EAAESLGMGKIESMVYIVLPQAFRITIPPLVNSFSSILKESSLISVLAITELTRIGQLIY 178

Query: 239 ARNFLVIELLCVASLWYLGITTIASIGQHYLERKL 273
            R     E+     L YL + +I SIG   +E+KL
Sbjct: 179 TRTSRPFEIYLTIGLIYLILVSIISIGSWKIEKKL 213