Pairwise Alignments

Query, 443 a.a., ABC transporter substrate binding protein (sugar) from Agrobacterium fabrum C58

Subject, 424 a.a., extracellular solute-binding protein, family 1 (NCBI) from Rhodospirillum rubrum S1H

 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 98/351 (27%), Positives = 157/351 (44%), Gaps = 38/351 (10%)

Query: 44  QTINVLFTNHPWPNAIKDMTSEFTKKTGIKVRVEILNEDPIRARLSTLMQARSSDVDAFI 103
           +TI +L  + P    +K +  +F K TGI V +E++N   +  +L   + +R     A +
Sbjct: 21  ETITILMESVPDTQYVKTLVPDFEKATGITVNLEVVNYAEMHTKLVPQLVSRKGGYSAIV 80

Query: 104 SLKIREGAVYNKAGWYADLNPLLKDASLTSPDFNFEDFGEGLRKNEIFDGKLTG----VP 159
                 G  + KAGW   L PL  D  + +  F+   +   L       GK+ G    +P
Sbjct: 81  VDFYWVGE-FIKAGW---LQPL--DERIGADHFDTAPYIPALMD---LVGKVDGTTYMLP 131

Query: 160 INVEGPLFYWRKDIFAK-CNVPEPQYLEDIPAAA-KTISECDKSVNAWTARGVRNAI--- 214
                    +R D+     N    +   + P  A +T  E  K V  +T  G    +   
Sbjct: 132 FYNYAMGLTYRTDLLTDPANQKAYEAANNAPLRAPETWDEYRKQVAFFTKDGFNGVVNQG 191

Query: 215 --PYPMA----SFVFNLGGDFKSADKTKPGLCQDKTIAGLQMYGDLLKTYGAVGASNHSF 268
             P P+A    +++F  GG F  A+  K  L   +  A L  Y + +  YG +G+++ SF
Sbjct: 192 LRPDPIAMEWSNYLFANGGSFHDAN-WKSTLNSPEAKAALDQYIESIDKYGPLGSASFSF 250

Query: 269 PQVVELLGQGKVAMTHESSNEFSNIVKFP------GRAEDLAIKVLPPGKESGISKPVAF 322
            +   ++ QGK A ++ + N F   +  P      G+AE L +  + P  E+  S   A+
Sbjct: 251 DEAFNVMAQGK-AYSYITYNFFRTSLDNPSQSSVVGKAEILPVPGVTP--ETSGSLNGAW 307

Query: 323 GWGLSMSNFSKRKEATWLFMQWATS-PEIEARLIQAGVAPPRSSVFDGADM 372
           GWG+  S  S   +A W F+ W  S P  +AR +Q G AP RS VFD A++
Sbjct: 308 GWGIPKS--SPNPDAAWKFLSWVESFPIAKARALQGG-APTRSDVFDDAEV 355