Pairwise Alignments

Query, 443 a.a., ABC transporter substrate binding protein (sugar) from Agrobacterium fabrum C58

Subject, 430 a.a., ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 67/284 (23%), Positives = 115/284 (40%), Gaps = 44/284 (15%)

Query: 141 FGEGLRKNEIFDGKLTGVPINVEGPLFYWRKDIFAKCNV---PEPQYLEDIPAAAKTISE 197
           F +G  +N   +GK  G+P      + Y+ K +F +  +     P    ++  AAK +++
Sbjct: 125 FYKGFMENSQTEGKTWGIPFQRSTIVMYYNKALFKEAGLNPDKAPANWNEMVEAAKKLTK 184

Query: 198 CDKSVNAWTARGVR-----------NAIPYPMASFVFNLGGDFKSADKTKPGLCQDKTIA 246
            D + N  T  GV+            A+     + + N  G     DK  PG  Q     
Sbjct: 185 RDAAGNV-TQWGVKIPSTGFGYWMFQAMTASNDTLLMNSAGTKTYFDK--PGAVQ----- 236

Query: 247 GLQMYGDLLKTYGAVGASNHSFPQVVELLGQGKVAMTHESSNEFSNI---VKFPGRAEDL 303
            LQ + DL      + A +  +    +   + K AM   ++   +NI     FP      
Sbjct: 237 ALQHWVDLTTKEKVMPAGSIEWGTTPKDFLEQKAAMVWTTTGNLTNIRTNASFP-----F 291

Query: 304 AIKVLPPGKESGISKPVAFGWGLSMSNFSK----RKEATWLFMQWATSPEIEARL-IQAG 358
            + +LP     GI  P +   G +   F+K     ++A   F+++AT P   A+  I  G
Sbjct: 292 GVAMLP-----GIKHPGSPTGGGNFYVFNKTSPAEQQAAMKFIRFATEPARAAQWSIATG 346

Query: 359 VAPPRSSVFDGADMKKFTDELPIRKSWADAIRQISKTGTGDYAS 402
              PR   +D  +MKK+  ++P     AD  R+  K G  + ++
Sbjct: 347 YVAPRQDAWDTPEMKKYLQDVPA----ADVAREQMKYGVAELST 386