Pairwise Alignments

Query, 443 a.a., ABC transporter substrate binding protein (sugar) from Agrobacterium fabrum C58

Subject, 447 a.a., ABC transporter for Xylitol, periplasmic substrate-binding component (from data) from Dinoroseobacter shibae DFL-12

 Score = 81.3 bits (199), Expect = 6e-20
 Identities = 104/440 (23%), Positives = 184/440 (41%), Gaps = 25/440 (5%)

Query: 4   MNFFRNSLAAASKMVALASCVVFTGSTAGAVDFNWRSQEGQTINVLFTNHPWPNAIKDMT 63
           M   RN L +A+    +AS  +  G      D       G T++V+F   P   AI+ M 
Sbjct: 1   MKTLRNLLCSAAVASVMASGAMADGHGWSLKDAA-APYAGTTVDVVFLLRPGYEAIEAML 59

Query: 64  SEFTKKTGIKVRV-EILNEDPIRARLSTLMQARSSDVDAFISLKIREGAVYNKAGWYADL 122
             F ++TGIKV V +   E+ +  ++   +     DV     + I   A        AD+
Sbjct: 60  PAFEEETGIKVNVIKHPYENALGEQVRDFVAGGDLDVALIDLVWIGSFAENEWILPLADV 119

Query: 123 NPLLKDASLTSPDFNFEDFGEGLRKNEI--FDGKLTGVPINVEGPLFYWRKDIFAKCNVP 180
                DA    PD + +DF   L  N    ++  + G+P +    L ++ + +  +    
Sbjct: 120 QAKFPDA--VDPDLDIDDFFP-LVLNAFGGWNDTIYGLPFDNYSGLMFYNRCMLEEAGFD 176

Query: 181 EP----QYLEDIPAAAKTISECDKSVNAWTARGVRNAIPYPMASFVFNLGGDFKSADKTK 236
            P    + L+D+   A T  +  K   A  ++          A  ++  GG F + ++ +
Sbjct: 177 GPPSTWEELKDVYGPALT--KDGKYAFALQSKRNETQSADSFARMLWPFGGSFLN-EEFR 233

Query: 237 PGLCQDKTIAGLQMYGDLLKTYGAVGASNHSFPQVVELLGQGKVAMTHESSNEFSNIVKF 296
             L  + + AGL+   +L++ Y   G   +   + V    QG VAM  E S  +S++V  
Sbjct: 234 SNLMSEGSQAGLKFRQELME-YMPDGIVAYDHAETVNAFSQGDVAMITEWSAFYSSVVSP 292

Query: 297 PGRAEDLAIKVLPPGKESGISKPVAFGWGLSMSNFSKRKE--ATWLFMQWATSPEIEARL 354
                   +++ P        KP   G+ L++++ +   E  A +LF+QWATS       
Sbjct: 293 ETSRVADCVEIAPEPMGPAGRKPALGGFSLAVASQADEAEQAAAYLFIQWATSKANAREY 352

Query: 355 IQAGVAPPRSSVFDGADMKKFTDELPIRKSWADAIRQISKTGTGDYASPTDKVPQTREII 414
           ++ G  P R SV+    +++F     + +SW D        G  ++     + P+  EI+
Sbjct: 353 LERGGVPARQSVYQQDGLEEFKFVPALVESWQD--------GVPEFRPRFAEWPEITEIV 404

Query: 415 GKVVQDYLLGANTIKEGACE 434
            +     +LG  T +EGA E
Sbjct: 405 QEWGTKMMLGEVTTEEGAQE 424