Pairwise Alignments

Query, 443 a.a., ABC transporter substrate binding protein (sugar) from Agrobacterium fabrum C58

Subject, 431 a.a., ABC transporter substrate-binding protein from Bifidobacterium breve UCC2003

 Score = 46.6 bits (109), Expect = 2e-09
 Identities = 52/240 (21%), Positives = 88/240 (36%), Gaps = 7/240 (2%)

Query: 118 WYADLNPLLKDASLTSPDFNFEDFGEGLRKNEIFDGKLTGVPINVEGPLFYWRKDIFAKC 177
           W AD +      S    +F+   F EG   N     +  GVP  V+  + Y+R DI  K 
Sbjct: 111 WMADFS---NSFSTVPGNFDMSGFFEGPADNYKVGDRQLGVPWYVDTRVLYYRTDIAEKA 167

Query: 178 NVPE-PQYLEDIPAAAKTISECDKSVNAWTARGVRNAIPYPMASFVFNLGGDFKSADKTK 236
            V E P+  +++   A+ + + D                  +  + ++ G       +TK
Sbjct: 168 GVTETPKTWDELKTMAEAMQKVDGVDYGMRIGASGTDCFIGILPYAYSAGAALSDDGQTK 227

Query: 237 PGLCQDKTIAGLQMYGDLLKTYGAVGASNHSFPQVVELLGQGKVAMTHESSNEFSNIVKF 296
             +  D     L       K   A   ++ S    +     G   M  +     S I + 
Sbjct: 228 WTIDSDAMTEALDYVTGFYKDGIADANADVSAGADIADFVAGTTPMMLQGPTAVSQIEEL 287

Query: 297 PGR-AEDLAIKVLPPGKESGISKPVAF--GWGLSMSNFSKRKEATWLFMQWATSPEIEAR 353
            G   +D    V  P  +       ++  G GL     SK K+A W F+QWA+  +++A+
Sbjct: 288 GGDDIKDKYATVTLPAMDDSSDMGTSYLGGSGLVTFKDSKNKQAAWKFIQWASRSDVQAK 347