Pairwise Alignments

Query, 443 a.a., ABC transporter substrate binding protein (sugar) from Agrobacterium fabrum C58

Subject, 440 a.a., ABC transporter for D-Sorbitol, periplasmic substrate-binding component (from data) from Burkholderia phytofirmans PsJN

 Score = 80.9 bits (198), Expect = 8e-20
 Identities = 109/438 (24%), Positives = 177/438 (40%), Gaps = 45/438 (10%)

Query: 30  TAGAVDFNWRSQEGQTINVLFTNHPWPNAIKDMTSEFTKKT-GIKVRVEILNEDPIRARL 88
           +AGAV     S    T+ +   N+P    +K ++ EF K    IK+   IL E+ +R R 
Sbjct: 13  SAGAVACFALSASAATVTIATLNNPDMIELKKLSPEFEKANPDIKLNWVILEENVLRQRA 72

Query: 89  STLMQARSSDVDAFISLKIREGAVYNKAGWYADLNPLLKDASLTSPDFNFEDFGEGLRKN 148
           +T +   S   D  +++   E   + K GW   L  L         D++  D  +  R  
Sbjct: 73  TTDITTGSGQFDV-MTIGAYETPQWGKRGWLTPLTNL-------PADYDLNDVVKTARDG 124

Query: 149 EIFDGKLTGVPINVEGPLFYWRKDIFAKC--NVPEPQYLEDIPAAAKTISECDKSVNAWT 206
               G+L  +P  VE  + Y+RKD+F K    +P+    + I   A  +++    +    
Sbjct: 125 LSSGGQLYALPFYVESSMTYYRKDLFEKAGLKMPDQPTYDQIKQFADKLTDKANGIYGIC 184

Query: 207 ARGVRN-AIPYPMASFVFNLGGDFKSADKTKPGLCQDKTIAGLQMYGDLLKTYGAVGASN 265
            RG           + V N  G     +K    L   +    +  Y DLLK  G  GAS+
Sbjct: 185 LRGKAGWGENMAYGTTVVNTFGGRWFDEKWNAQLTSPEWKKAMTFYVDLLKKDGPPGASS 244

Query: 266 HSFPQVVELLGQGKVAMTHES--------SNEFSNIVKFPGRAEDLAIKVLPPGKESGIS 317
           + F + + L+  GK AM  ++        + + S I    G A    + V P G      
Sbjct: 245 NGFNENLTLMSSGKCAMWIDATVAAGMLYNKQQSQIADKVGFAA-APVAVTPKGSH---- 299

Query: 318 KPVAFGWGLSMSNFSKRKEATWLFMQWATSPE-IEARLIQAGVA--PP--RSSVFDGADM 372
               + W L++   SK+ +A   F+ WATS + IE      G A  PP  R S +  A+ 
Sbjct: 300 --WLWAWALAIPKSSKQADAAKKFITWATSKQYIELVAKDEGWASVPPGTRKSTYARAEY 357

Query: 373 KK---FTDELPIRKSWAD----AIRQISKTGTGDYASPTDKVPQTREIIGKVVQDYLLGA 425
           K+   F D +      AD     ++ +  TG      P  +      ++G+ +   + G 
Sbjct: 358 KQAAPFGDFVLKAIETADPEHPTLKPVPYTGVQFVGIP--EFQSFGTVVGQSISGAIAGQ 415

Query: 426 NTIKE----GACEADKAL 439
            TI +    G   AD+A+
Sbjct: 416 MTIDQALAAGNATADRAV 433