Pairwise Alignments

Query, 297 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 314 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  135 bits (341), Expect = 9e-37
 Identities = 89/269 (33%), Positives = 141/269 (52%), Gaps = 6/269 (2%)

Query: 30  VGLMIVF--PILYAIWLSLRENSLGMDDRFVGLANYVELLSDGEFHNAFILTWVLYGLAL 87
           +GL I    P+  ++ LS+ E +      FVG  NY+ + +D  F     +T +   + +
Sbjct: 38  LGLFIFLGVPMALSLVLSVFEVNGFGGYSFVGARNYLRMWNDPLFWKGARVTALYAAMLV 97

Query: 88  AMQMVIGTWLGFTLNRVRSARNLVRTAAIMPFMMPPVVVGMMAIVILDPAVGVANWLLGQ 147
            +  V G  L   + R      ++R+    P M+  VVV ++   ++   +GV + L   
Sbjct: 98  PLLYVCGLGLALLVQRTDRFNAIMRSMFFAPHMVSLVVVALVWQFMVVDKIGVVSRLTAA 157

Query: 148 VGIGPSLWLADPKWVLLTVAAVDTWQWSPLIGLLVLGGLQSLPTKVFEAAEIDGVIGWKR 207
           + IG    L DP + L+T+  V  W       L+ LGGLQ +P + +EAA IDG     R
Sbjct: 158 LDIGGISLLGDPNFALITIVLVSVWFLMGFYMLIFLGGLQDIPRQYYEAAMIDGAGAIAR 217

Query: 208 LVHITLPLLAPT---LLSAAILRSVDLLRFFDVIYITTRGGPGNASTTLNIYAYQQGFEF 264
              ITLPLL PT   ++  +++ +V   + FD+IY+ T+GGP NA++ L +Y YQQ F F
Sbjct: 218 FWFITLPLLKPTSFFVIMVSMVAAVAGAQAFDIIYVMTKGGPANATSVLIVYIYQQAFGF 277

Query: 265 SRFGYASA-GMITLAAVVMVTVVAFSRLR 292
             FGYA+A   I + A+++VT V F+  R
Sbjct: 278 GAFGYAAAMASILVVALMIVTAVFFALTR 306