Pairwise Alignments

Query, 277 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 277 a.a., ABC transporter for D-sorbitol, permease component 2 (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  154 bits (388), Expect = 3e-42
 Identities = 91/272 (33%), Positives = 154/272 (56%), Gaps = 8/272 (2%)

Query: 10  SLTERLRGGLSTVILVIAAITPILWMILSSFKDRYEVTKLPPSLFFTPTLDNYRQLFERT 69
           SL   L G L+ V  ++    PI WM+L+SFK   +    PP   F PTL+NY  + ER+
Sbjct: 9   SLQSLLLGTLAWVAALLLFF-PIFWMVLTSFKTEIDAFATPPQFIFMPTLENYLHIQERS 67

Query: 70  EFLSNTLNSLIVSTGATLLGIMLAFPAAFAVSWH---RTTWPATLALFSRMAPGTLFLLP 126
           ++     NS+++S  AT L +++A PAA++++++   RT       L ++M P    L+P
Sbjct: 68  DYFHFAWNSVLISFSATALCMLIAVPAAYSMAFYETKRTKQTLLWMLSTKMLPPVGVLMP 127

Query: 127 WFIIFSELGLVGSYTVLILTHAVIAMPVALWTMLPYFDAMPRELVEAAQMDGCRPLSVLW 186
            +++    GL+ +   LI+ + +I +P+ +W +  YF  +PRE++EAA++DG      + 
Sbjct: 128 IYLLAKGAGLLDTRIALIVIYTLINLPIVVWMIYTYFKDIPREILEAARLDGATLGQEML 187

Query: 187 RIVLPVVMPGVVVSSILCFIFTWNYFLFALALSGFDTK--TAIVASFNFIGEGVTNWGAL 244
           R++LP+   G+  + +L  I  WN   ++L L+       TA++AS++   EG+  W  L
Sbjct: 188 RVLLPISKGGLASTMLLSMILCWNEAFWSLNLTSSSAAPLTALIASYS-SPEGLF-WAKL 245

Query: 245 MAAATMIALPPLILTLLVQRRLVAGLSAGAVK 276
            A +T+   P LI   + Q++LV GLS GAVK
Sbjct: 246 SAVSTLACAPILIFGWISQKQLVRGLSFGAVK 277