Pairwise Alignments

Query, 277 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 285 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  112 bits (280), Expect = 9e-30
 Identities = 87/287 (30%), Positives = 139/287 (48%), Gaps = 23/287 (8%)

Query: 8   QPSLTERLRGGLSTVILVIAAITPILWMILSSFKDRYEVTKLPPS-LFFTP--------T 58
           QP++  R R     ++ +   I   L  IL+ F + + V+  P   LF +P        +
Sbjct: 3   QPAMINRYRW--YELVGIYGGIFVFLTFILAPFVEGFLVSLKPLGRLFSSPYRFWPENGS 60

Query: 59  LDNYRQLFERTE-FLSNTLNSLIVSTGATLLGIMLAFPAAFAVSWHRTTWPATLA---LF 114
            + YR ++     F     NS  +S   T + + L  PAA+A +  +      L    L 
Sbjct: 61  FEAYRTMWVSVPGFARYIFNSFFISIIVTAVVLALVVPAAYAFARFKFRGSGALLAAFLA 120

Query: 115 SRMAPGTLFLLPWFIIFSELGLVGSYTVLILTHAVIAMPVALWTMLPYFDAMPRELVEAA 174
             M  G + L+P F +    G++ +Y  +I+      +P A+W +  Y   +PREL EAA
Sbjct: 121 VNMFSGAVLLIPLFRLMRSFGVLNTYFAMIVPGVAFLIPSAIWLLRTYMMRIPRELDEAA 180

Query: 175 QMDGCRPLSVLWRIVLPVVMPGVVVSSILCFIFTW-NYFLFALALSGFDTKTAI----VA 229
            +DG      L R++LP+ MPG+ V +I  FI ++   F+FAL    F++K+      V 
Sbjct: 181 FVDGASHFYTLRRVILPIAMPGITVVAITTFIGSYAQQFIFALT---FNSKSEYMPLPVG 237

Query: 230 SFNFIGEGVTNWGALMAAATMIALPPLILTLLVQRRLVAGLSAGAVK 276
            F + G     W  LMAA+ +   P +I+   +QR LV+GL+AGAVK
Sbjct: 238 LFAYFGRQEVVWNELMAASFVGIAPAVIVIFFLQRYLVSGLTAGAVK 284