Pairwise Alignments

Query, 277 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 276 a.a., ABC transporter for D-Sorbitol, permease component 1 (from data) from Phaeobacter inhibens DSM 17395

 Score =  145 bits (367), Expect = 7e-40
 Identities = 90/252 (35%), Positives = 149/252 (59%), Gaps = 8/252 (3%)

Query: 31  PILWMILSSFKDRYEVTKLPPS-LFFTPTLDNYRQLFERTEFLSNTLNSLIVSTGATLLG 89
           PILW IL+SFK   +    PP  LFF  TL+NY  + ER++++    NS+I++ G+T+LG
Sbjct: 27  PILWTILTSFKTEAQAISDPPVFLFFDWTLENYSVVQERSDYMRFLWNSVIIAGGSTILG 86

Query: 90  IMLAFPAAFAVSW---HRTTWPATLALFSRMAPGTLFLLPWFIIFSELGLVGSYTVLILT 146
           I++A PAA+++++    RT       L ++M P    L P +I+F ++GL+ +   L++ 
Sbjct: 87  IIIAVPAAWSMAFVPSKRTKDILLWMLSTKMLPAVGVLYPIYILFIKMGLLDNRFGLVVV 146

Query: 147 HAVIAMPVALWTMLPYFDAMPRELVEAAQMDGCRPLSVLWRIVLPVVMPGVVVSSILCFI 206
             +I +P+ +W +  YF  +P E++EAA+MDG      +  ++ P+ +PG+  + +L  I
Sbjct: 147 LMLINLPIIVWMLYTYFKEIPGEILEAARMDGATLKEEILYVLTPMAIPGIASTLLLNII 206

Query: 207 FTWNYFLFALALSGFDTK--TAIVASFNFIGEGVTNWGALMAAATMIALPPLILTLLVQR 264
             WN   + L L+       TA +AS++   EG+  +  L AA+TM   P LIL    Q+
Sbjct: 207 LAWNEAFWTLNLTAAKAAPLTAFIASYS-SPEGLF-YAKLSAASTMAIAPILILGWFSQK 264

Query: 265 RLVAGLSAGAVK 276
           +LV+GL+ GAVK
Sbjct: 265 QLVSGLTFGAVK 276



 Score = 24.3 bits (51), Expect = 0.003
 Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 17/103 (16%)

Query: 22  VILVIAAITPILWMILSSFKDRYEVTKLPPSLFFTPTLDNYRQLFERTEFLSNTLNSLIV 81
           V+L++  +  I+WM+ + FK+      +P  +     +D      E    L+      I 
Sbjct: 145 VVLMLINLPIIVWMLYTYFKE------IPGEILEAARMDGATLKEEILYVLTPMAIPGIA 198

Query: 82  STGATLLGIMLAFPAAFAVSWHRTTWPATLALFSRMAPGTLFL 124
           ST   LL I+LA        W+   W   L   ++ AP T F+
Sbjct: 199 ST--LLLNIILA--------WNEAFWTLNLTA-AKAAPLTAFI 230