Pairwise Alignments

Query, 341 a.a., LacI family transcription regulator from Agrobacterium fabrum C58

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  148 bits (374), Expect = 2e-40
 Identities = 105/331 (31%), Positives = 162/331 (48%), Gaps = 9/331 (2%)

Query: 13  TVHSVAAAAGVSKSTVSRILDERLPRSDSETAQRVREIAAELGYVRDVSAANLRRGSTMT 72
           T+  VA  AGVS +TVSR L     +  S T +RV E   E GY  +  A NLRR  + T
Sbjct: 3   TMKDVAQLAGVSTATVSRALMNP-EKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKT 61

Query: 73  IGVIVPRLTDTVMAMLYEAIAKACTRSGRFAIVATTEDKPQADRLAAESLLNRGVDGLIL 132
           I  IVP + D   + +   I  A    G   ++  +  + + +      +  +  DG++L
Sbjct: 62  IVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLL 121

Query: 133 STARGDDDFPDELRERGVPYVLALRTDGH-SLSAVGDDRL-GGYLATRHLLDLGHERIGV 190
                  D     ++   P V+A        L  V  D L   + A  +L  LGH+RI  
Sbjct: 122 LGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQ 181

Query: 191 IAGPDYASSATGRVDGYRHALEEASISVDPQLIVPSTFGIQSGAEAIEKLMGLGCRPTAI 250
           I+GP +A+    R  GY+ AL  A I+++P       F  ++GA+A+ +L+ L  +PTAI
Sbjct: 182 ISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTAI 241

Query: 251 FAVNDNTAIGALSALSKMGISVPDDVSLVGYNDIPIVSHLPTPLTTLRVPFDQIAANA-- 308
           F  ND  AIGA+    ++G+ VP D+S+VG++DI    +   PLTT+  P  +I   A  
Sbjct: 242 FCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAML 301

Query: 309 --IDLLTHTTALRDNRILVSAPTLIPRKSTA 337
             ++LL        +R+L +   L+ R+S A
Sbjct: 302 MMLELLRGHDVRAGSRLLET--KLVVRESAA 330